KEGG   Bacillus subtilis subsp. subtilis 168: BSU16780
Entry
BSU16780          CDS       T00010                                 

Gene name
rnjB
Definition
(RefSeq) ribonuclease J 2
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSU16780 (rnjB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsu03019]
    BSU16780 (rnjB)
Enzymes [BR:bsu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.-  Acting on ester bonds
    3.1.-.-  
     BSU16780 (rnjB)
Messenger RNA biogenesis [BR:bsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BSU16780 (rnjB)
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Lactamase_B_6
Other DBs
NCBI-GeneID: 938463
NCBI-ProteinID: NP_389560
Pasteur: BG13422
BSORF: BG13422
UniProt: O31760
Position
1749418..1751085
AA seq 555 aa
MKKKNTENVRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYL
IERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRKTDLR
EIHSKSVITFESTKVSFFRTIHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPALNQTCDIG
EIAKIGNSGVLALLSDSANAERPGYTPSEAAVSGEISDALYNSQNRVIIAVFASNINRIQ
QVIHAAAQNGRKIAVAGKNLQSVLQLARKLGYIEADDELFISVQDVKKYPKREVAIITAG
SQGEPLAALTRMANKAHKQLNIEEGDTVVIASTPIPGQELIYSKTVDLLARAGAQVIFAQ
KRVHVSGHGSQEELKLMINLLKPKYLIPVNGEYRMQKAHSKIAEETGMKRSDIFLIEKGD
VVEFRGQNVKIGDKVPYGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKQKKHL
VSGPEIITRGFVYVRESEGLIVQATELVRSIVTEATETSNVEWSTLKQAMRDALNQFLYE
KTKRKPMIIPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
ttgaaaaagaaaaatacagaaaacgttagaattatcgcccttggcggtgtcggagagatt
gggaagaacctttatgtcattgaaattgactcagacatatttgtcgttgatgccggcctt
atgcatccagaaaacgaaatgctcggtattgatgtagtgattcctgacatatcatatttg
attgaacgggctgaccgcgtcaaggcaatctttttaacgcacgggcacgatgaaaatatc
ggcggcgttttttacttattaaacaagctgtccgttccagtgtacggaacaaaactgacg
cttgcactgttaagagagaaattaaaacaatacggacataaccgaaaaactgatttaaga
gaaattcactccaaatctgtcattacatttgaatcaacaaaggtatcgttctttagaacg
attcacagcattcctgattctgtaggtgtgagctttaaaacatcacttggatctattgta
tgcacgggagacttcaaatttgaccaaacacctgcacttaatcagacgtgcgacattggc
gagatcgccaagatcggcaatagcggcgtgctcgctctgctttctgacagtgcaaatgcg
gaacggccgggttacaccccttcggaagcggctgtcagcggagaaatttcggatgcgctg
tataattcacagaaccgggtgattattgctgttttcgcatccaatattaaccggattcag
caagtcattcatgcagcggctcaaaatggcagaaagattgccgtagccggaaaaaatctt
caatctgtcctgcagctggcgagaaagttaggatatattgaagcagatgatgaattgttt
atttctgtacaggatgtcaaaaaatatccgaagcgcgaagtggccattattacagccgga
agccaaggtgaaccattagctgctttgacaagaatggcaaacaaagctcacaaacagctg
aacattgaagaaggggatacggtggtcattgcgtcaactccgattcccgggcaggaactc
atttactctaaaacagtagatcttcttgcgagagccggtgcacaagtcatctttgcccaa
aagcgtgttcatgtatcaggccacggctcacaagaagagttaaagctgatgatcaacctg
cttaaaccaaaatatttgattcctgtaaacggcgaatacagaatgcaaaaagctcattca
aaaatcgctgaagaaaccggcatgaagcgcagtgacatcttcttaattgaaaaaggcgac
gtcgttgaattccgcggccaaaacgtaaaaattggggataaagttccttacggcaatatt
ttaattgatggtttaggtgtcggtgatatcggcaatatcgtattgagagaccgccgcttg
ctttcacaggacggaattttaatcgttgtcattacacttgataaacaaaagaaacatctt
gtatcaggaccagaaattatcactcgcggctttgtttatgtaagagagtctgaaggtctt
atcgtacaggctactgagcttgtacggtccatcgtgacagaagcgactgaaacatcaaat
gtcgaatggtcaacgctgaagcaggcaatgcgggatgctttgaaccaattcctttatgaa
aaaacgaaacgtaaaccgatgatcatcccaattattatggaagtataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BSORF (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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