KEGG   Bacillus subtilis subsp. subtilis 168: BSU20340Help
Entry
BSU20340          CDS       T00010                                 

Gene name
yorL
Definition
(RefSeq) DNA polymerase YorL
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Module
bsu_M00260  DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU20340 (yorL)
   03430 Mismatch repair
    BSU20340 (yorL)
   03440 Homologous recombination
    BSU20340 (yorL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU20340 (yorL)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU20340 (yorL)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU20340 (yorL)
DNA replication proteins [BR:bsu03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU20340 (yorL)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU20340 (yorL)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6
Motif
Other DBs
NCBI-GeneID: 939437
NCBI-ProteinID: NP_389916
Pasteur: BG13696
BSORF: BG13696
UniProt: O31902
Position
complement(2175596..2179513)
Genome map
AA seq 1305 aa AA seqDB search
MIGCHCHTDRSNIRLLDSTNSVKELLKTAVKMEYKGLAITDHEVLSAHLDAIRTVREMKK
KGDMPEDFKLILGNEAYLVDSLEEVRDNYKSGVTKFPHFLMLAMDPKGHEQLRILSSQAW
ENSFYTGTMERVPTVKKDVEELLSKDPGHIIATTACLGSEVNIHLLKIKAFEETGDSQSI
KQHKLKIHEFITWCIEVFGKDKFFIELQPALSEEQIYCNKKLIDIANGYDLQMIVTTDAH
YLRPEDRAIHQAFLNAKDGEREVDSFYEACFVQNVDEIHERMDYIDKEVIDQAIKNTMLI
GEMIEDYTIEHEPIIPKMELPNFKLRHLFKPAYDQYEYIKKMSESADEQDRYLLKLIEDG
FEEKLKTSELTREAFHKILNRINVELGELWEISQKLNQSMSSYYITVREIINIIWDDECG
GDSLVGAARGSAAGYLVNYLLDNTQINPMQYDLPHWRHIHKSRPDLPDIDIDTEGSKRQK
ILKALRERFGDKRVLQIATFGTEGSKSALQTACRGLGIDNDISQYLSGMIPFERGSNWPL
KHCFYGDKETGRKPIKEFIREVEQYPNLKETALKIEGLTNKRSSHAAGVIIFNDEYTKSN
AMMKTPKGAYITQFNMGDSEAMGSVKFDLLTIEALDKIRVTLDQLIENNEIEWQGSLKET
YNKYIHPDVIEYEDDKLWEMAGNGEIMDLFQFSTEVGHQSVVKVKPKNLLEAAVTNSLMR
LMSDGEEQPVDTYVKYKNNLNKWYEEMTRYGLSEKEIRVMERHLKDIYGVADTQEVVMQM
VMDKDIANFDIKESNYLRKSIAKKKEDVLKEVEELFFKKGKEIGTSDNLLNYVWNVQFKR
QFGYSFSLLHTLAYSIIALQELNLNYRYNPLYWNTACLTVNSGGIDTEDTKDNKKTAATN
YGKVASAIGNIRQRGIKIDLPDINKADFGFRTDINNNSILFGLKGMNGIGDDVIHHIVLN
RPYSDFNDFIERMFKSGIIKKGQVIQLIKGGCFDSFGNRQEIMKAFISLISEPKSKLTLS
NLKMLIENNIVPSEFAQEVRFFRFKDYISKKVYKTLKSPKDKLFLLDDVSASFYNQHFSE
DSVVDMLNGQLVISEKAFKKEYDNKMSNIKSWITTEEPLKKLNDCLLIKEWEKYADGSLG
KWEMDSLSYYYNDHELSGVNFAKYDIADFYKLPAEPVKGKPYQWRGKTLYEYETTRIIGT
VLDRDKNKHAITLLTPTGVVTVKQWSGSFSHYNKQISRSIGGGKKEVIEKSWYTRGTLLM
FTGFRRGNNFIPKVYKDSIYNHTVCRIDFVDNEGSMSLTTKRAEI
NT seq 3918 nt NT seq  +upstreamnt  +downstreamnt
ttgataggatgtcactgtcacacagataggagtaacataaggcttctagactcaacaaac
tcagttaaagaactgctcaaaactgcagtaaagatggaatataagggattggccataaca
gaccatgaagtcctctcagcacatttagatgctattcgaacagttagagaaatgaaaaag
aagggggatatgccagaagattttaaactgatattgggcaatgaagcgtacctagtcgat
tctttagaggaagttcgagataactataaatcgggagtgacaaaatttccgcatttcttg
atgttggcaatggatccaaaaggacatgagcagttaagaatactgtcttctcaagcctgg
gaaaactcattttatacaggaacaatggaaagagtgccgacagtaaaaaaggatgtagag
gagctattaagtaaagatccaggccacatcattgctaccacagcttgcttggggtctgag
gtaaacattcacctgttaaagataaaggcttttgaagaaactggtgattctcagtcaatt
aagcagcacaaactaaagattcatgagtttataacttggtgtatagaggtttttgggaag
gataagttttttatcgagcttcaacctgcactgagtgaagaacagatttactgtaacaag
aagctgatagatatagccaacgggtatgacttgcaaatgattgttacaacagatgctcac
tatctaagaccagaagatagagcaattcatcaagcctttttaaacgctaaggatggagaa
agagaagttgattccttttatgaagcctgtttcgttcaaaacgttgatgaaattcacgag
agaatggactacattgataaagaagtcatcgatcaggccataaaaaatacaatgctcatt
ggtgagatgattgaagactatactatagagcacgaaccaattatccctaagatggagctt
cctaactttaaattaagacatttatttaaaccagcatatgatcaatatgaatatataaaa
aagatgtctgaatcagcagatgaacaagatagatatctccttaagttaattgaggacgga
tttgaagagaaattaaaaacaagcgaactaacgagagaagcttttcataaaatattgaac
aggattaacgttgaactgggtgaactttgggaaatcagccaaaagctgaatcagtctatg
tcttcttattacataacagttagagaaatcattaatattatttgggatgatgagtgtgga
ggagatagtttagttggggcagccaggggaagtgctgcaggttacttagttaattatcta
ctcgacaatactcaaattaatccaatgcaatatgatttaccacattggagacatatacat
aaatcgagacctgacctaccagatatcgatattgatactgaaggatcaaaaagacaaaaa
attcttaaggcactaagagaaaggtttggagacaagcgtgttcttcaaattgctactttt
ggaactgagggttcaaaatcagcgcttcagacagcatgtagaggcttaggaatcgataat
gatatatcccagtatttaagtggaatgattccatttgaaagaggatctaactggcctttg
aagcattgtttttatggtgacaaagaaactggcaggaagccaattaaagagtttattagg
gaggttgaacaataccctaatcttaaagaaacagctttaaaaattgaagggttaactaat
aagcgctcttctcatgcagccggagtaattatctttaacgatgaatatacaaagtcgaat
gcaatgatgaaaactcctaaaggagcttatattacacagtttaatatgggtgacagtgaa
gccatgggctcagtaaagtttgaccttcttacaattgaagctttagataagattagagta
acattagaccaattaatcgagaataatgaaattgaatggcaaggaagcttgaaggaaaca
tacaacaaatacatccatccagacgtaattgagtatgaagatgataagctatgggaaatg
gctggtaatggggaaatcatggatttattccagttctcaactgaagtcggtcatcaatca
gttgtcaaagtaaaacctaagaacttacttgaagcagcagtaaccaattctttaatgagg
cttatgtcagacggtgaagaacagcctgtagatacatatgttaaatacaaaaataacctt
aataaatggtatgaagaaatgacacggtacggtctaagcgaaaaggaaatcagagtaatg
gagaggcaccttaaggacatttatggtgttgctgatactcaagaagtggttatgcagatg
gttatggataaagatatagctaactttgacattaaagaatcaaattatcttaggaaatcc
atagcaaaaaagaaagaagatgtactaaaagaagtggaagaattgttttttaaaaaagga
aaggagattggcacttctgataacctgttgaattatgtctggaatgttcaatttaaaaga
cagtttggctacagttttagtttacttcataccttggcatattcaattattgcattacag
gaattgaacttaaactatcgatataatcctttatactggaatactgcttgtttaacggta
aacagcggaggaatagataccgaggatacaaaagacaacaaaaagacagctgctacaaac
tacggaaaagttgcttcagccatcggaaacattagacaaagagggattaaaatagacctc
ccagatataaataaggctgattttggttttaggactgatattaacaacaattcaatttta
tttggacttaaaggaatgaatggaattggagacgatgttattcatcatatagttctaaat
agaccatatagtgactttaacgactttattgaaagaatgtttaagagcggcattattaag
aaaggacaagtaatccaattaataaaaggaggctgctttgattcttttggaaacaggcaa
gaaatcatgaaggcctttattagcttaatatcagaaccaaaaagtaagcttacgttgtct
aatttaaaaatgctaattgaaaacaacattgttccttcagaatttgcacaagaagtgaga
ttctttcgttttaaagattacatcagcaaaaaggtgtacaaaacattaaagtcgccaaaa
gataaactttttttattggacgatgtatcagcttcgttttataaccagcatttcagtgag
gatagtgtagttgacatgttaaacgggcagcttgtcatttctgaaaaagcttttaaaaaa
gaatatgataacaagatgtctaatataaagtcctggataacaacagaagaaccactgaag
aaattgaatgattgtttattaataaaagagtgggaaaaatacgccgatgggtcattagga
aagtgggaaatggattcattgagctattattataatgaccatgagctttctggtgtaaac
tttgccaagtatgatattgctgacttttataaactgccagcagagccggtcaaaggtaaa
ccttatcaatggagagggaaaactctctatgaatatgagactacacggattataggcact
gttttagatagggataaaaacaaacatgcaattactcttctaacacctacaggggtggtt
acagttaaacagtggtcgggcagctttagtcattacaataaacagatttctagatcaatt
ggtggcggaaagaaagaggtaatcgagaaatcttggtataccagaggaacattgctcatg
tttactggtttcagaagaggtaacaattttattccgaaggtctataaagatagcatatat
aatcacacagtctgcagaatagattttgttgataatgaaggaagtatgagtttgacaact
aaaagggcagaaatataa

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