KEGG   Bacillus subtilis subsp. subtilis 168: BSU25560Help
Entry
BSU25560          CDS       T00010                                 

Gene name
holA
Definition
(RefSeq) hypothetical protein
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03030  DNA replication
bsu03430  Mismatch repair
bsu03440  Homologous recombination
Module
bsu_M00260  DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSU25560 (holA)
   03430 Mismatch repair
    BSU25560 (holA)
   03440 Homologous recombination
    BSU25560 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsu03032]
    BSU25560 (holA)
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU25560 (holA)
Enzymes [BR:bsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSU25560 (holA)
DNA replication proteins [BR:bsu03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSU25560 (holA)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSU25560 (holA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_pol3_delta
Motif
Other DBs
NCBI-GeneID: 937833
NCBI-ProteinID: NP_390434
Pasteur: BG11642
BSORF: BG11642
UniProt: P54459
Structure
PDB: 

Position
complement(2636096..2637139)
Genome map
AA seq 347 aa AA seqDB search
MVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQTVVDQETKDFNLSVFDLEEDPLD
QAIADAETFPFMGERRLVIVKNPYFLTGEKKKEKIEHNVSALESYIQSPAPYTVFVLLAP
YEKLDERKKLTKALKKHAFMMEAKELNAKETTDFTVNLAKTEQKTIGTEAAEHLVLLVNG
HLSSIFQEIQKLCTFIGDREEITLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFYD
LLKQNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFS
EEELRLIIEQLAVMDYEMKTGKKDKQLLLELFLLQLLKRNEKNDPHY
NT seq 1044 nt NT seq  +upstreamnt  +downstreamnt
atggtatttgatgtgtggaaaagcctgaaaaaaggagaggtccatccggtttattgttta
tacggaaaagagacatatctgctgcaagaaaccgtcagcaggatcagacagacggtcgtt
gatcaggagacaaaggatttcaatctgtccgtttttgatctggaagaggacccgctggat
caagcgattgcagatgctgaaacgtttccgtttatgggggagcggcgtcttgtcattgtg
aaaaatccatattttttaacaggtgaaaagaaaaaagaaaaaattgagcacaacgtcagt
gcgcttgaatcatatatacaatcacctgcgccttacacagtctttgtcctgcttgctccg
tatgaaaagcttgatgagcgaaaaaagctgacgaaagcgttaaagaagcacgcgtttatg
atggaggcgaaggaattaaatgcaaaggaaacgacagactttactgtcaaccttgcaaaa
acagagcagaaaacaatcggcacggaagcggcggagcatttggttctgcttgtgaacggt
catctgtcatcgatttttcaggagattcaaaagctctgcacgtttattggagatcgtgaa
gaaattacgctggatgatgtaaaaatgcttgttgctagaagccttgaacaaaatattttt
gagctgatcaataaaatcgtcaaccgaaaacgaacagagagtctgcaaattttttatgat
ttgctaaaacaaaatgaagaaccgatcaaaattatggcgcttatttcgaatcagttccgg
ctgattctgcagacgaagtacttcgcggaacagggatacggacaaaaacaaatcgcttct
aatctaaaagttcacccatttcgggtaaagctggcgatggatcaagcaaggcttttttca
gaggaggagctccgtttaattattgaacagcttgccgtcatggactatgagatgaaaacc
gggaaaaaggacaagcagctcctgctcgaactgttccttttacagctgttaaaaagaaat
gaaaaaaacgatccccattattga

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