KEGG   Bacillus subtilis subsp. subtilis 168: BSU28590
Entry
BSU28590          CDS       T00010                                 

Gene name
yshC
Definition
(RefSeq) DNA polymerase/3'-5' exonuclease PolX
  KO
K02347  DNA polymerase (family X)
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsu03400]
    BSU28590 (yshC)
DNA repair and recombination proteins [BR:bsu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    BSU28590 (yshC)
SSDB
Motif
Pfam: HHH_8 DNA_pol_B_thumb PHP HHH_5 RNase_P_p30 DNA_pol_B_palm L-fibroin
Other DBs
NCBI-GeneID: 937426
NCBI-ProteinID: NP_390737
Pasteur: BG12327
BSORF: BG12327
UniProt: P94544 A0A6M4JMH3
Position
complement(2923314..2925026)
AA seq 570 aa
MHKKDIIRLLETIAVYMELKGDNPFKVSAFRKAAAALEQDDRSLSEMDDMMSLSGIGKGT
YSVIKEYIDEGKSSTLESLQKEVPEGLVPLLKLPGLGGKKIAKLYKELGVHDAESLKEAC
EQQKVQGLAGFGKKSEEKILQALGEAGKQPERFPIGYALRIAREIEEHLSQFTHIIKFSR
AGSLRRARETVKDLDYIIATDHPAEVREQLLELPNIKSVIASGDTKVSVILSFEYETSVD
FRLVTEEQFPTTLHHFTGSKDHNIKMRQIAKERGERISEYGVETVETGEIKTFPSEREFY
AHFGLPLIPPEIRESGQEVETYSDSIELIELGQIKGDLHMHSTWSDGAFSIREMAEACIK
KGYQYMAITDHSQYLKVANGLTAERLKQQAKEIDALNAEFENFRILKGVEMDILPDGTLD
YDDDVLAEMDIVIASIHSSFNQPEHVIMKRLETALTNKHVDIIAHPTGRLIGRRAGYEID
IDQLIELARKTNTALELNANPARLDLRTEHLMKANEQGVTLVINTDAHNIEMLDDMKTGV
TAARKGWTETKNVLNARSLKDVEAFLKRND
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgcataaaaaagatattatccggctgcttgaaaccattgcagtctatatggaactcaaa
ggggacaacccgtttaaagtatccgccttccgaaaagcggcggcagctctggaacaggac
gaccgaagcttatcagaaatggacgatatgatgtcgctgtccggcattggaaaaggaacg
tacagcgtcattaaagagtatatagatgaaggaaagtcaagcacgctcgaatcgcttcag
aaagaagtgccggaaggactcgtgcctttattgaagctgccggggctcggcggcaaaaaa
atcgcaaagctgtataaagagctcggcgtacacgatgcagaatctctgaaggaagcctgt
gagcagcaaaaggtccagggtcttgcgggcttcggcaaaaaatcggaagaaaaaatatta
caggcgctcggggaagccggaaaacagcctgaacggttcccgatcggctacgccctccgg
atcgcgcgggaaattgaggagcatctttctcaatttacgcatatcatcaaattttctcgt
gccggaagtctccgcagagcgcgggaaacggtgaaggatctggattatatcattgctaca
gatcatccggctgaagtaagagagcagcttcttgagctgccaaacatcaaaagcgtgatc
gcaagcggagatacgaaggtgtccgtcatcctttcctttgaatatgaaacaagcgtcgat
ttccgtcttgtgacggaagagcagtttccgacaacactccatcattttacgggatcaaag
gatcacaatattaagatgcgccaaatcgccaaagaacgcggcgagcggatcagtgaatac
ggcgttgagacagttgaaaccggagagatcaaaacatttccgagtgaacgtgaattttat
gcgcacttcggcctgccgctgattccgccggaaattcgtgaaagcggacaggaagtggaa
acctacagcgacagcattgaactgatagagctcgggcaaatcaaaggtgatctccacatg
cactcaacgtggagcgatggcgcattttcgatcagagagatggctgaagcctgcatcaaa
aaaggctatcaatacatggcgatcaccgatcactcacaatatttaaaggtcgccaacggg
cttactgcagaaagacttaagcagcaggcaaaagaaattgacgcgctgaatgcagagttt
gaaaacttccgtattttgaaaggcgttgagatggatatcctgcctgacggtacgctcgat
tatgatgacgatgtgcttgcggaaatggatatcgttattgcatcgattcattccagtttt
aatcagccggaacacgtgattatgaaacggcttgagacggcactgacaaacaagcatgtt
gacattatcgcacacccgaccgggcgccttatcggcagacgggccggttacgaaatcgat
attgatcagctgattgagcttgcgaggaaaacaaatacggcgcttgaactcaatgccaac
cctgcgcgccttgatctgcgcacagagcatttaatgaaagcaaacgaacaaggggttaca
ttggtgattaatactgatgcccataatattgagatgttagacgatatgaaaactggcgtt
actgccgcgcgcaaaggatggacggaaacgaaaaacgttctgaatgcccggtcgcttaaa
gacgtagaggcatttctgaagcgcaacgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BSORF (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system