KEGG   Bacillus subtilis subsp. subtilis 168: BSU33610
Entry
BSU33610          CDS       T00010                                 
Symbol
rnr
Name
(RefSeq) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bsu  Bacillus subtilis subsp. subtilis 168
Pathway
bsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSU33610 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsu03019]
    BSU33610 (rnr)
   03016 Transfer RNA biogenesis [BR:bsu03016]
    BSU33610 (rnr)
Enzymes [BR:bsu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BSU33610 (rnr)
Messenger RNA biogenesis [BR:bsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BSU33610 (rnr)
Transfer RNA biogenesis [BR:bsu03016]
 Prokaryotic type
  tRNA degradation factors
   BSU33610 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 OB_RNR_1st S1CSD-TOTE-2 S1_RRP5 TFIIE_beta CSN8_PSD8_EIF3K CsrA
Other DBs
NCBI-GeneID: 938644
NCBI-ProteinID: NP_391241
Pasteur: BG14065
UniProt: O32231 A0A6M3ZKU9
Structure
Position
complement(3451863..3454202)
AA seq 779 aa
MEKEAFMEKLLSFMKEEAYKPLTVQELEEMLNITEAEEFKELVKALVALEEKGLIVRTRS
DRYGIPEKMNLIKGKISAHAKGFAFLLPEDTSLSDVFIPPNELNTAMNGDIVMVRLNSQS
SGSRQEGTVIRILERAIQRVVGTYTETRNFGFVIPDDKKITSDIFIPKNGKNGAAEGHKV
VVKLTSYPEGRMNAEGEVETILGHKNDPGIDILSVIHKHGLPGEFPADAMEQASSTPDTI
DEKDLKDRRDLRDQVIVTIDGADAKDLDDAVTVTKLDDGSYKLGVHIADVSHYVTENSPI
DKEALERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINSQGQVTEHEIFQ
SVIKTTERMTYSDVNKILVDDDEELKQKYEPLVPMFKDMERLAQILRDKRMDRGAVDFDF
KEAKVLVDDEGAVKDVVIRERSVAEKLIEEFMLVANETVAEHFHWMNVPFIYRIHEEPNA
EKLQKFLEFVTTFGYVVKGTAGNIHPRALQSILDAVRDRPEETVISTVMLRSMKQAKYDP
QSLGHFGLSTEFYTHFTSPIRRYPDLIVHRLIRTYLINGKVDEATQEKWAERLPDIAEHT
SSMERRAVDAERETDDLKKAEYMLDKIGEEFDGMISSVTNFGMFVELPNTIEGLVHVSFM
TDDYYRFDEQHFAMIGERTGNVFRIGDEITVKVVDVNKDERNIDFEIVGMKGTPRRPREL
DSSRSRKRGKPARKRVQSTNTPVSPAPSEEKGEWFTKPKKKKKKRGFQNAPKQKRKKKK
NT seq 2340 nt   +upstreamnt  +downstreamnt
atggaaaaagaagcatttatggaaaagcttctctcgtttatgaaggaagaggcgtacaaa
cctctgaccgttcaggaacttgaggagatgttaaatattacggaagccgaggagtttaaa
gagctcgtcaaagcgttagtcgccttggaagaaaaagggcttatcgtacggacgagaagc
gaccgctacggcattccggagaagatgaatttaataaaaggaaagatttcagcccatgcg
aaaggattcgcctttttgctgcctgaggatacgtcgttaagtgatgtgtttattccgcct
aatgagctaaatacggcaatgaacggcgatatcgtcatggtgcgtctgaactcacaatca
agcggctccaggcaggaaggaaccgtcatacggattttagaaagagcgattcagcgggtt
gtcggcacgtatacagaaacgagaaacttcggctttgtcattccggacgacaaaaaaatc
acgagtgacatcttcattccgaaaaatgggaaaaatggagctgcggaagggcataaggtt
gttgtcaagctgacgagctatcctgaaggccgcatgaacgcagagggtgaggttgaaacc
attctcggccacaaaaacgacccgggcattgatattttatcggtcattcataagcacggc
ctgccgggagaatttccagctgacgcgatggaacaggcatcaagtacgcctgacacgatt
gatgaaaaagatctgaaagaccgccgtgatctccgtgaccaggtgattgtcaccattgat
ggtgcggatgcgaaggatttggatgatgcagttaccgtgacgaagcttgatgatggaagc
tacaagcttggcgttcacatagctgatgtcagccattacgtaaccgaaaactcgccgatt
gacaaagaagcgcttgaaagagggacaagtgtgtatctggttgaccgtgtcatcccgatg
attccgcacagattgtcaaacggcatctgctccttaaatccaaaggttgaccgcctgacg
ctttcttgtgaaatgacaattaacagtcagggacaggtgacagagcacgagatcttccaa
agtgtcatcaaaacaacggaaagaatgacatattcagatgtgaataaaattcttgttgat
gatgatgaagagctgaaacaaaaatacgagcctcttgttccgatgttcaaagacatggag
cgtctggctcaaattctgcgcgataagcggatggaccgcggcgccgttgactttgatttc
aaagaagcaaaggtgcttgttgatgacgaaggagcggttaaagacgttgtgatcagagaa
cgctctgtcgccgagaagctgattgaagaatttatgcttgtagcaaacgaaacagttgcg
gagcatttccattggatgaatgtcccgtttatataccggattcacgaagagccgaatgct
gaaaagctgcaaaagtttttagaatttgtgacgacatttggctatgtggtgaaaggaacg
gcggggaatattcatccgcgcgcgctgcaaagcattctggacgctgtgcgtgacagacca
gaggaaacggttatatctactgttatgctccgttcgatgaaacaggcgaaatacgacccg
caaagcttggggcacttcggtctgtcaacggaattctatacgcatttcacatcaccgatc
cgccgttacccggacttaatcgttcaccgtctgatccgaacgtatttgatcaacggcaag
gtcgatgaagcgacacaggaaaagtgggctgaacgcctgccggatatcgccgaacataca
tcatctatggagcgccgtgcagttgacgccgagcgtgagacggatgatctgaaaaaagcg
gaatacatgcttgataaaatcggtgaagagtttgacggcatgatcagctctgtgacaaac
ttcggaatgttcgtcgagctgccgaatacaattgaaggactcgtccatgtcagctttatg
acagatgactactaccgctttgacgaacagcatttcgcaatgattggcgagcggacaggc
aacgtcttccgcatcggggatgaaatcacagtcaaggttgtcgatgtcaataaagatgag
cgcaatatcgactttgaaattgtcggcatgaaaggcactccgcggcgtccgagagaattg
gacagcagccggagcagaaaacgcggaaagcctgccagaaaacgtgttcaaagcaccaat
acacctgtttctccagctccgtctgaggaaaaaggggagtggttcactaagccgaagaag
aaaaagaaaaaacgcggcttccagaatgctccgaaacagaaacggaaaaagaagaaatag

  All links  
Gene (27)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (5)   
   PDB (5)   
Protein domain (10)   
   Pfam (10)   
All databases (46)   

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