KEGG   Bacillus subtilis subsp. subtilis JH642: BSUA_00136
Entry
BSUA_00136        CDS       T03443                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bsul  Bacillus subtilis subsp. subtilis JH642
Pathway
bsul03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bsul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BSUA_00136 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsul03021]
    BSUA_00136 (rpoC)
   03400 DNA repair and recombination proteins [BR:bsul03400]
    BSUA_00136 (rpoC)
Enzymes [BR:bsul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BSUA_00136 (rpoC)
Transcription machinery [BR:bsul03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BSUA_00136 (rpoC)
DNA repair and recombination proteins [BR:bsul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BSUA_00136 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 Peptidase_M23 Apocytochr_F_C RPOC_hybrid
Other DBs
NCBI-ProteinID: AIC38483
Position
125562..129161
AA seq 1199 aa
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAIHKLLQ
DIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTEEQRSKLLITTVGKLVFNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGA
DVKAVIAQQPINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLDDKQEILEEAQSKVDNVMKQFRRGLITEEERYERVISIWSAAKDVIQGKLMKSL
DELNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKPLKEGTETIERLE
ERLIGRFARKQVKHPETGEVLVNENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATITEIDGTVVEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDKITR
GQVLTEGSIDPKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTEANKKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKVKPVSNVQPTDDMVPVE
NT seq 3600 nt   +upstreamnt  +downstreamnt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccagataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttaaaa
cctgaaaaggacggtctattctgcgaacgcattttcggaccgactaaggactgggaatgt
cattgcgggaagtacaagcgagttcgttataaaggcgtagtttgtgaccgctgcggagtc
gaagtaacacgggctaaagtccgtcgtgagagaatggggcacattgaactggctgcccca
gtttcccacatttggtatttcaaaggtattccaagccgtatgggtcttgtgctggatatg
tcacctcgtgctttagaagaagtcatttactttgcttcttacgttgtaactgatccggcg
aatacaccgcttgaaaagaaacagcttctgtctgagaaagaataccgtgcttatcttgat
aaatacggtaataaattccaagcatctatgggtgctgaagcaattcataaacttcttcaa
gatatcgatcttgtaaaagaagttgatatgttaaaagaagagctgaaaacttcacaagga
caacgccgtactcgtgcgatcaaacgtcttgaagttttagaagccttccgtaactcagga
aacaagccttcttggatgatccttgatgtgcttcctgttattcctccggagcttagaccg
atggttcagctagatggcggacgttttgcgacttctgatttgaatgacctttatcgtcgt
gtcatcaaccgtaacaatcgtttgaaacgccttttggaccttggtgcgcctagcatcatc
gttcaaaacgaaaagcgtatgcttcaagaggctgtcgatgccctaattgacaacggccgc
cgcggacgccctgtaacaggtcctggaaacagaccgttaaaatctctttctcacatgctg
aaagggaagcaaggccgtttccgtcaaaaccttcttggtaaacgtgtcgattactccgga
cgttctgtaatcgttgttggtcctcatttgaaaatgtaccaatgcggattaccgaaggaa
atggcacttgaacttttcaaacctttcgttatgaaagaacttgttgaaaaaggtcttgct
cacaacattaagagtgcgaaacgcaaaattgagcgcgtacagcctgaagtttgggatgta
ctagaatcagttattaaggagcatccggtactgctgaaccgtgcccctacacttcacaga
ttaggtatccaggcgtttgaaccaacgcttgttgaaggacgcgcaatccgtcttcacccg
ctcgtatgtacagcttacaacgctgactttgacggtgaccaaatggcggttcacgtacca
ttatctgctgaagcacaagctgaagcacgcatcttgatgcttgctgctcaaaacatcttg
aaccctaaagatggtaaaccggttgtaacaccgtctcaggatatggtactaggtaactat
tacctgacacttgagcgtgccggtgctgtcggtgaaggtatggtcttcaagaatacagac
gaagcgcttcttgcttatcaaaacggatatgttcaccttcatacgagagtagctgttgca
gctaactcacttaagaatgtgacatttaccgaagaacagcgctcaaaattgttaattaca
actgtcggtaagcttgtcttcaatgaaattcttccggaatcattcccttacatgaatgaa
ccaacgaagagcaacattgaagagaaaacacctgaccgtttcttcttagaaaaaggtgct
gatgttaaagctgttatcgcacagcagccaatcaatgcgccgtttaaaaaaggcattctg
ggtaaaatcatcgcggaaatctttaaacgattccatattacggaaacgtctaaaatgctt
gaccgcatgaaaaacctaggtttcaaatattcaactaaagctggtattacagttggggtt
tctgacatcgtcgtactcgatgataaacaagaaattcttgaggaagcgcaaagcaaagtt
gacaacgttatgaagcaattccgccgcggtcttatcactgaagaagaacgctatgagaga
gtcatctctatctggagtgctgcaaaagacgttatccaaggcaaactgatgaaatcactt
gatgaactcaacccgatctacatgatgagtgactctggtgcccgtggtaacgcatctaac
tttacgcagcttgccggaatgcgcggcctgatggccaacccggctggacgtatcattgag
ttgccgatcaaatcaagtttccgtgaaggtctgacagtattggagtactttatctccaca
cacggtgcgcgtaaaggtcttgccgataccgctcttaaaactgctgactcaggttacctt
acacgccgtctcgttgacgttgctcaggatgttatcatccgtgaaactgattgcggaact
gaccgaggcattcttgctaagcctcttaaagaaggaactgaaacaattgagcgcttagaa
gaacgcttaatcggacgttttgcaagaaaacaagtgaagcaccctgaaacaggtgaagtg
cttgtgaatgaaaacgaactgatcgatgaagataaagcactggagattgtcgaagccggc
attgaagaagtgtggatccgttctgccttcacatgtaatacgcctcatggtgtatgtaaa
cgatgctatggccgaaatcttgcaactggctccgatgttgaagtcggtgaagctgtcgga
atcattgctgcccaatcaatcggtgagcctggtacacagttaacaatgcgtacattccat
acaggcggggttgccggagacgatatcacacagggtcttccgcgtatccaagagcttttc
gaagcgcgtaatccgaaaggtcaggcaacaattacagaaatcgacggtacagtcgttgag
atcaatgaagttcgtgataagcaacaggaaattgtggttcaaggcgcagtggaaacacgt
tcttatacggcaccttacaactcccgcctgaaagtagcggaaggagataaaattactcga
ggccaagtactgacagaaggttcaatcgatccgaaagaacttcttaaagtgactgacctg
acgactgttcaagagtatcttctccatgaggttcaaaaggtttaccgtatgcagggtgtt
gaaatcggtgataaacacgtagaagtaatggttcgccagatgcttcgcaaagtacgcgtg
attgatgccggtgacactgatgtgcttccaggtacattgcttgatattcaccaatttact
gaagcgaacaaaaaggtattgcttgaaggcaaccgaccagctacaggccgtcctgtctta
ctcggtattacaaaagcatctcttgaaactgattcattcttatctgctgcttccttccag
gaaacaacacgtgtccttacagatgcagcgatcaaaggtaagcgtgacgagcttctcggc
ttgaaagagaatgttatcatcggtaagcttgttccagcaggtacaggaatgatgaaatac
cgtaaagtaaaaccagtatcaaatgttcagccgactgacgatatggtcccggttgaataa

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