KEGG   Bacillus subtilis subsp. subtilis JH642: BSUA_00229
Entry
BSUA_00229        CDS       T03443                                 
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
bsul  Bacillus subtilis subsp. subtilis JH642
Pathway
bsul03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bsul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BSUA_00229 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsul03400]
    BSUA_00229 (alkA)
Enzymes [BR:bsul01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     BSUA_00229 (alkA)
DNA repair and recombination proteins [BR:bsul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BSUA_00229 (alkA)
SSDB
Motif
Pfam: OGG_N HhH-GPD AlkA_N
Other DBs
NCBI-ProteinID: AIC38556
Position
complement(202555..203466)
AA seq 303 aa
MTWHEVNDVIVITLPEIFDMNANLGYLTREKNECMYEIENNIITKVIAIGEIRSLVQVSV
INNKQMIVQFLNDSRPVEQWKREEIVKYIHEWFDLDNDLTPFYEMAKADPLLKMPARKFY
GLRVIGIPDLFEALCWGVLGQQINLAFAYSLKKQFVEAFGDSIEWNGKKYWVFPPYERIA
RLTPTDLADIKMTVKKSEYIIGIARLMASGELSREKLMKMNFKDAEKNLIKIRGIGPWTA
NYVLMRCLRFPTAFPIDDVGLIHSIKILRNMNRKPTKDEILEISVPWKEWQSYATFYLWR
VLY
NT seq 912 nt   +upstreamnt  +downstreamnt
gtgacatggcatgaagtcaatgatgttattgtcattacattacctgaaattttcgacatg
aatgcgaaccttggctacctaaccagggaaaaaaatgaatgcatgtatgaaatagagaac
aatatcattacaaaagttatagccattggggaaattcggtccttagtgcaggtaagcgta
atcaataataaacaaatgattgttcaattcctaaacgattctagacctgttgagcagtgg
aaacgggaagagattgtaaaatatattcatgaatggtttgatcttgataacgatttaact
ccattttatgaaatggcaaaagcagatccattacttaaaatgcctgcccgaaaattttat
gggttgcgagtgatcggcattcccgatttatttgaagctttatgttggggagttttaggg
caacaaattaacttagccttcgcgtactccttaaagaagcaatttgtagaagcatttggc
gattctattgaatggaatggtaaaaagtattgggtgttcccaccgtacgagcgaattgca
cggttaacccctaccgacctggcagatattaaaatgacggtgaaaaaaagtgaatatatc
attggaatagccagattaatggcaagtggagaattatcgagggaaaaattaatgaaaatg
aactttaaagatgctgaaaaaaacttaattaaaatacgaggaatcggtccttggacagcc
aattatgttctaatgcgctgccttaggttcccgacagcttttccaatcgatgatgtgggt
cttattcattcgataaaaatattacgtaatatgaaccgaaagcctacgaaagatgaaatc
ttagaaatatcggttccatggaaagaatggcaatcatacgctaccttttatttatggcgt
gtcctttactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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