KEGG   Bradyrhizobium symbiodeficiens: CIT39_20910
Entry
CIT39_20910       CDS       T06284                                 
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
bsym  Bradyrhizobium symbiodeficiens
Pathway
bsym00540  Lipopolysaccharide biosynthesis
bsym01100  Metabolic pathways
bsym01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:bsym00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    CIT39_20910 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:bsym01005]
    CIT39_20910 (rfaD)
Enzymes [BR:bsym01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     CIT39_20910 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:bsym01005]
 Core region
  CIT39_20910 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4
Other DBs
NCBI-ProteinID: AWM08660
UniProt: A0A2U8QEP2
Position
complement(4403261..4404241)
AA seq 326 aa
MLLVTGGAGFIGSNAVAALNDAGRSDVVVCDFLGNEGKWRNLAKRQLVDIVPPAELMDWL
KGRKLDAVIHLGAISATTATDGDLVFETNFRLSMRLLDWCAASAVPFIYASSAATYGDGE
AGFDDDGSLPALKKLRPMNLYGWSKHMFDLAVAERAARGEKLPPQWAGLKFFNVFGPNEY
HKGSMMSVLARRFDDVKAGRVVQLFKSHREGIADGDQRRDFIYVDDVVRVVMWLLATPSV
SGLFNVGTGKARSFRDLMLAAYAALGTRPNIEYIDMPEQIRGAYQYFTQSEVDRLHRAGY
NGGFTTLEDAVKAYVGDYLDRPDRFR
NT seq 981 nt   +upstreamnt  +downstreamnt
atgttgctggtgaccggcggggccggttttatcgggtcgaatgccgtggccgcgctcaat
gacgccggccgcagtgacgtcgtggtctgcgatttcctcggtaacgaggggaagtggcgg
aacctcgccaagcgccagcttgtggatatcgtcccgccggccgagctgatggactggctg
aagggccgcaagctggacgccgtgatccatctcggagcgatttccgcgaccactgcgacc
gacggcgacctcgtgttcgagaccaatttccgcctgtcgatgcgccttctcgattggtgc
gcggcgagcgcggtgcccttcatctatgcttcctcggcggcgacctatggcgacggcgag
gcgggttttgacgacgacggctcgctgccggcactgaagaaactgcggccgatgaatctc
tacggctggagcaagcacatgttcgatctcgcggtcgccgaacgtgccgcgcgtggcgag
aagctcccgccgcaatgggctggcctgaaattcttcaacgtgttcggccccaacgaatat
cacaagggctcgatgatgagcgtgctggcgcggcgcttcgacgacgtcaaggcaggccgc
gtcgtgcaattgttcaagtcgcaccgtgagggcatcgccgacggcgatcagcgccgcgat
ttcatctatgtcgacgacgtcgtgcgcgtcgtgatgtggctgcttgcgacaccatcggtg
tccggactcttcaacgtcggaaccggcaaggcgcgcagcttcagggatctgatgttggcg
gcctatgcggcgctcggcaccaggccaaacatcgaatatatcgacatgcccgagcagatc
cgcggggcctaccagtacttcacccagagcgaggtcgatcgcctccaccgcgccggctat
aacggcggcttcacgacgctcgaggatgcggtgaaggcctatgtcggggattacctcgac
cggcccgaccgcttccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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