KEGG   Bos taurus (cow): 100296970
Entry
100296970         CDS       T01008                                 
Symbol
PNN
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
bta  Bos taurus (cow)
Pathway
bta03013  Nucleocytoplasmic transport
bta03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100296970 (PNN)
   03015 mRNA surveillance pathway
    100296970 (PNN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    100296970 (PNN)
   03041 Spliceosome [BR:bta03041]
    100296970 (PNN)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100296970 (PNN)
Spliceosome [BR:bta03041]
 Complex C
  Other components
   EJC/TREX
    100296970 (PNN)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 100296970
NCBI-ProteinID: NP_001229514
Ensembl: ENSBTAG00000026995
VGNC: 33087
UniProt: Q3SYT5
Position
21:49159939..49166921
AA seq 721 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVVR
NEEQKSEQEEGKVAQREEELEETGNQHNDVEIEEAGEDEEKEIGIVHSDAEKEQEEEEQK
QEMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMEINQVESIEPSEN
ETSKELEPEMEFEVEPDKECKSVSPAKENASTLEMENEPEEKEEKESEPQPEPMAQPQSL
PQPQPQSQSQSQSQPQQVLQPPPLSQPETLPLAVSQPPPQVIQEQGHLPPERKEFLVESV
KLTEVTEPVLTVHSESKNKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSS
SSGSSSSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSVDRKRRD
ASGLERSHKSAKGGSSRDAKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR
R
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aatgtggatgagaatattcgcaagctcaccgggcgggatccgaatgatgtgaggcccatc
caagccaggttgctcgccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggaggggagcgtcggactcgacgagaatcacgccaagaaagc
gacccagaggatgatgatgttaagaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacggagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
agaaaccggcgaatatttggcttgttgatgggcacccttcagaaatttaaacaagaatcc
actgttgctaccgaaaggcaaaagagacgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaaacaggttgaaaatgagaggagagaactgtttgaagagagacgt
gctaaacagacagaactgcggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaaatatatcagaactaaaacaaagccccat
ttgttctatattcctggaagaatgtgtcctgctacccaaaaattaatagaggagtctcag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtggtgcgt
aatgaagaacagaagtcggaacaagaagagggtaaggtggctcagcgagaggaagagttg
gaggagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggacgaggaa
aaggaaattggtatagttcatagtgatgcagagaaggaacaggaggaggaggaacaaaaa
caggaaatggaagtaaagatggaggaggaaactgaggtaagggaaagtgagaagcagcag
gatagtcagcctgaagaagttatggatgtgctagagatggttgagagtgtcaaaaatgta
attgctgagcaggaggtaatggaaatcaatcaagttgaaagcatagaaccttcagaaaat
gaaactagcaaagaattggagccagaaatggaatttgaagttgagccagataaagaatgt
aaatctgtttctcctgcaaaagagaatgctagtactctagaaatggaaaatgagcctgag
gaaaaagaagaaaaagaatctgagccccaacctgagcctatggctcaacctcagtccctg
cctcagccccagccccaatctcaatctcaatcccagtctcagccccaacaggtactccag
cccccgcctctctctcagcctgagactttgccattagctgtttctcagccaccacctcag
gttattcaggagcaaggacatttaccacctgagaggaaggagtttcttgtagaatctgta
aaactcactgaggtgacagagccagtcctgacggtacattcagagagcaagaacaaaacc
aaaactaggagcagaagtagaggtcgagctagaaataaaacaagcaagagtagaagtcga
agcagtagcagtagtagttctagtagcagttcaaccagtagcagcagtggaagcagttcc
agcagtggcagtagcagtagtcgaagtagttccagtagcagctcaagtacaagtggcagc
agcagtagagacagtagcagcagcacgactagcagtagtgagagcagaagtcggagtagg
ggccgggggcataacagagatagaaagcacagaaggagcgtggatcggaagcgaagggat
gcttcaggactagaaagaagtcacaagtctgcaaaaggaggtagtagtagagatgcaaaa
ggatcaaaggataagaattcccggtctgacagaaagaggtctatatcagagagtagtcga
tcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaagg
cgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (49)   

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