KEGG   Bos taurus (cow): 100336715
Entry
100336715         CDS       T01008                                 
Symbol
A1CF
Name
(RefSeq) APOBEC1 complementation factor isoform X1
  KO
K24978  APOBEC1 complementation factor
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    100336715 (A1CF)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    APOBEC1-ACF complex
     100336715 (A1CF)
SSDB
Motif
Pfam: RRM_1 DND1_DSRM RRM_7 RRM_5 BRAP2
Other DBs
NCBI-GeneID: 100336715
NCBI-ProteinID: XP_005225429
Ensembl: ENSBTAG00000021195
VGNC: 25434
Position
26:8455414..8555102
AA seq 595 aa
MESNHKSGDGLSGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFI
GKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKQEAKNAIKQLNNYE
IRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRG
FAFVEYENHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLML
STSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFTNREDAVEAMKALNGKVLDGSPIEVTL
AKPVDKDSYVRYTRGTGGRGAMLQGEYTYSLGHVYDPTTTYLGAPVFYAPQAYTAIPSLH
FPTTKGHLGNRAIIRAPSVREIYMNVPVGAAGVRGLGGRGYLAYTGLGRGYQVKGDKRED
KLYDLLPGMELTPMNPVTLKPQGIKLAPQILEEICQKNNWGQPVYQLHSAIGQDQRQLFL
YKITIPALASQNPAIHPFTPPKLSAYVDEAKTYAAEYTLQALGIPTDGADAQTAAAAAAS
ATAFPGYAVPSPTASVSAAQLKQAVTLGQDLAAYAAYEVYPTFAVTARGDGYGTF
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggaatcaaatcacaaatccggggatggattgagcggaacccagaaggaagcagctctt
cgcgcactggtccagcgcacaggatatagcttggtccaggaaaatggacaaagaaaatac
ggaggtcccccacctggttgggatgctgcacccccagaaaggggctgtgaaatttttatt
ggaaaactcccccgagacctttttgaagatgagcttatcccactatgtgaaaaaattggt
aaaatttatgaaatgagaatgatgatggattttaatggcaacaatagaggctatgcattt
gtaacattctcaaataaacaggaagccaagaatgcaatcaagcaacttaataattatgaa
atcagaaatgggcgtctcttaggggtctgtgccagtgtggacaactgccgattgtttgtc
gggggaattccaaagaccaaaaagagagaagaaatcttatcagagatgaaaaaggtcacc
gaaggagtcgtggatgtcatcgtctatccaagtgctgcagataaaaccaaaaaccgcggc
tttgccttcgtggaatatgagaatcaccgggcagctgccatggcccggaggaagcttctc
ccaggaagaattcagttatggggacatcctattgcagtagactgggcagaaccagaagta
gaagttgatgaagacacaatgtcctcagtgaaaattctgtacgttagaaacctaatgctg
tctacctcagaagagatgattgagaaagaattcaataatattaaaccaggtgctgtggaa
agggtgaagaaaatccgagactatgcgtttgtgcacttcactaaccgagaagatgcagtg
gaggctatgaaagctttaaatgggaaggtgctggacgggtcccccattgaagtgacccta
gccaaaccagtggacaaggacagttacgttaggtacacccgaggaacgggtggaaggggc
gccatgttgcagggagagtatacctactctttgggccatgtttatgatcccaccaccacc
taccttggagcgcctgtcttctatgccccccaggcctacacagcgattcccagccttcat
ttcccaaccaccaaaggacatcttggcaacagggccattatccgggccccttctgttaga
gaaatttacatgaatgtacctgtaggggctgcgggagtgagaggcctgggcggccgtggc
tatttggcttacacaggcctgggccggggataccaggtcaaaggagacaagagagaagac
aaactctatgaccttttacctgggatggagctcaccccgatgaatcctgtcactttaaag
cctcaaggaattaaacttgctccccagatattggaagaaatttgtcagaaaaataactgg
ggacaacctgtgtatcaacttcactctgccattggacaagatcaaagacaactcttctta
tacaaaataaccattcctgccctggccagccagaatcctgccatccatcctttcacacct
ccgaagctaagtgcctatgtggatgaagcaaagacatacgcggccgagtacaccctgcag
gccctgggcatccccactgatggagccgatgcccagaccgcagctgctgccgccgcttct
gctactgcgtttccaggctacgctgtccccagcccaactgcatctgtgtctgcagcccag
ctcaagcaagcggtgaccctgggacaagacttggcagcatatgcagcgtatgaggtctac
cccacttttgcagtgactgcccgaggggatggatatggaaccttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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