KEGG   Bos taurus (cow): 282365
Entry
282365            CDS       T01008                                 
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
  KO
K05037  solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
bta  Bos taurus (cow)
Pathway
bta04721  Synaptic vesicle cycle
bta04726  Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:bta00001]
 09150 Organismal Systems
  09156 Nervous system
   04726 Serotonergic synapse
    282365 (SLC6A4)
   04721 Synaptic vesicle cycle
    282365 (SLC6A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bta02000]
    282365 (SLC6A4)
Transporters [BR:bta02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   282365 (SLC6A4)
SSDB
Motif
Pfam: SNF 5HT_transport_N
Other DBs
NCBI-GeneID: 282365
NCBI-ProteinID: NP_777034
Ensembl: ENSBTAG00000019349
VGNC: 49971
UniProt: Q9XT49
Position
19:complement(21290410..21323269)
AA seq 630 aa
METTPLNSQKELSAYKDGEDCQENGVLQKGVPAPGDKAESGQISNGYSAVPNPGAGDDTQ
HSIPAATTALVAEVHPAERETWAKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWTKICPIFKGIGCAICLIAFYIASYYNTII
AWALYYLISSFTEQLPWTSCENSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGLSWQLVLCIMFIFTVIYFSIWKGVKTSGKVVWVTATFPYIILLILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQD
ALVTSAVNCMTSFVSGFVIFTVLGYMAEMRKEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIVFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRREWFVLGVVITCFFGSLVT
LTFGGAYVVKLLEEFATGPAVLTVALIEAVAVFWFYGINQFCSDVKEMLGFSPGWFWKIC
WVAISPLFLLFIICSFLMSPPQLRLFQYDYPRWSIILGYCIGTSSFICIPTYITYRLIVT
PGTLKERIIKGITPETPTAIPCGDIRLNAV
NT seq 1893 nt   +upstreamnt  +downstreamnt
atggagaccacccccttaaattcccagaaggagctatcagcgtataaggatggagaagat
tgtcaggaaaatggggttctacagaagggtgtccccgcccctggggataaggcagagtcc
ggccagatctccaacgggtactcagcggttccgaaccctggcgcaggagacgacactcag
cactccatcccggctgccaccaccgccctagtggctgaggttcatccagcagagcgggag
acctgggccaagaaggtggatttcctcctctctgtcattggctatgctgtggacctgggc
aacgtctggcgctttccctacatttgttaccagaatggagggggggcgttcctccttccc
tacactatcatggccatttttggggggatcccgctcttctacatggagctcgcactgggg
cagtaccaccgaaatggatgcatttcgatatggacaaaaatctgcccaattttcaaaggg
ataggttgcgccatctgcctcatcgccttctacatcgcctcctactacaacaccatcata
gcctgggccctctactacctcatctcctccttcacggagcagctgccctggaccagctgc
gagaactcctggaacactggcaactgcaccaactacttctccgaggataacatcacctgg
acgctccactcaacgtcccctgcagaagaattttacacgcggcacgtcctgcagatccac
cggtcgaaggggctccaggacctggggggcctcagttggcagcttgtcctgtgcatcatg
ttcatcttcactgttatctactttagcatctggaaaggcgtcaaaacatctggcaaggtg
gtttgggtgacagccaccttcccttacatcattcttttgatcctgctggtgaggggggcc
accctccctggagcctggaggggagttctcttctatttgaaacccaactggcagaaactc
ctagagacgggggtgtgggtggatgcagccgcccagatcttcttctctctcggccctggc
tttggggtcctactggcttttgcgagctacaacaaattccacaacaactgttaccaagac
gccctggtgaccagtgcagtgaattgcatgacgagcttcgtttcaggatttgtcatcttc
acagtgctggggtatatggctgagatgaggaaagaagatgtgtctgaggtggccaaagat
gcaggccccagcctcctgttcatcacatacgcagaagccatagccaacatgccagcatcc
acattctttgccatcgtcttcttcctgatgttaatcaccctgggcttggacagcacgttt
gcaggcttggagggggtgatcacagctgtgctagatgagtttccacatgtctgggccaag
cgccgggagtggtttgtgcttggcgtggtcattacctgcttctttggatctctggtcacc
ttgactttcggcggggcctatgtggtgaagctgttggaggagttcgccacgggacctgca
gtgctcaccgtggccctgattgaagcagttgctgtgttttggttctacggcatcaatcag
ttctgcagtgatgtgaaggaaatgcttggtttcagccctggatggttctggaagatctgc
tgggtagccatcagtcctctgtttctcctgttcatcatctgcagttttttgatgagccca
ccacagctacgacttttccagtatgattatcctcggtggagcatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatataacctatcggctgattgtcact
ccagggacacttaaggagcgtattattaaaggtatcacgccagaaacaccgacagcaatt
ccctgtggggacatccgcttgaatgctgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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