KEGG   Bos taurus (cow): 282704
Entry
282704            CDS       T01008                                 
Symbol
TBC1D1
Name
(RefSeq) TBC1 domain family member 1
  KO
K18341  TBC1 domain family member 1
Organism
bta  Bos taurus (cow)
Pathway
bta04152  AMPK signaling pathway
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04152 AMPK signaling pathway
    282704 (TBC1D1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bta04131]
    282704 (TBC1D1)
Membrane trafficking [BR:bta04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    282704 (TBC1D1)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    282704 (TBC1D1)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab associated proteins
    282704 (TBC1D1)
SSDB
Motif
Pfam: RabGAP-TBC DUF3350 PID ER
Other DBs
NCBI-GeneID: 282704
NCBI-ProteinID: NP_001159996
BGD-bta: BT19719
Ensembl: ENSBTAG00000013699
VGNC: 35623
UniProt: O97790
Position
6:57203557..57429961
AA seq 1165 aa
MEPITFTARKHPFPNEVSVDFGLQLVGSLPVHSLTTMPMLPWVVAEVRRLSGQSSKKEPG
TKPVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKN
DAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSEFDDTFAKKFEVLFCGR
VAVAHRKAPPALIDECIEGFSHVSGGFSSDQSRSALQPPGDGERGPRPMRKSFSQPGLRS
LAFRKEFQDAGLRSSSFFSSFEESDIENHLISGHNIVQPTDIEENRTMLFTIGQSEVYLI
SPDTKKIALQKNFKEISFCSQGIRHVDHFGFICRESSGGGGFHFVCYVFQCTNEALVDEI
MMTLKQAFTVAAVQQTAKAPAQLCEGCPLQGLHKLCERIEGMNSSKTKLELQKHLTTLTN
QEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHIHIGEIKQTSQIAAENIGSE
LPSSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSASLDLDSSVSSMFSNTSK
EPSGYEKEALPISESCFRLLGSSDDLSSDSESQLTEEPALLSPKQGFRRRANTLSHVPVE
CQEPPQLVRGSPGVSQRKLVRYHSVSTETPHERKDFESKADHISDASRTPVKTRRHSWRQ
QIFLRVATPQKACESPKRYEDYSELGELPPRSPLEPVCEDGPFGPVPEEKKRTSHELREL
WQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKILSTPGR
SKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHPFPCKQQPKDTPYKELLKQLTS
QQHAILIDLGRTFPTHPYYSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLH
MGEEEAFNMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPS
LYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIV
DFIKSTLPNLGLVQMEKTISQVFETDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKL
EKTNSSLRKQNLDLLEQLQVANGRIQSLEATVEKLLTSESKLKQATLALELERSALLQTV
EQLRRQTAELGSQESDPTLPKPSGD
NT seq 3498 nt   +upstreamnt  +downstreamnt
atggaaccaataaccttcacagcaaggaaacacccattccctaacgaggtctccgtggac
ttcggcctccagctggtgggctccttgcctgtgcattctctgactaccatgcccatgctg
ccgtgggtggtggcagaggtgcgaaggctcagcgggcagtcttccaaaaaggagcctggc
accaagccagtccgcctttgtgtttcgccctctggattgagatgtgagcctgagccagga
aaaagtcaacaatgggatccattgatctgttccagtatcttcgagtgtaagcctcaacga
gttcacaaactgattcacaatagtcacgacccaagttattttgcttgtctgattaaaaat
gatgcagccaatcagcagagtatctgctatgtgttcaaagccgatgatcaaacaaaagtg
cctgagatcatcagttccatccggcaggctgggaagatcgcccgccaggaggagctccgc
tgcccttcggagttcgatgacacattcgccaagaagttcgaggtgctgttctgcggccgc
gtggccgtggcgcacaggaaggctccacccgccctgatcgatgagtgcatcgaaggcttc
agtcacgtgagcggtggcttctcctcggatcagtcccggtctgcactgcagccaccgggg
gatggggagcggggcccgcggccgatgcgcaagtccttctcgcagcccgggctgcgctcc
ttggctttccgaaaggagtttcaggatgcaggcctgcggagtagtagtttcttcagctct
tttgaggagagcgacatcgagaaccacctgattagtggacacaatattgtgcagccgaca
gatattgaggaaaatcgaactatgctcttcacgattggtcaatctgaagtttacctcatc
agtcctgacaccaaaaaaatagcgttgcagaaaaattttaaggagatatccttttgctct
cagggtattagacatgtggaccactttgggttcatctgccgtgagtcttccggaggtgga
ggctttcatttcgtctgttacgtgtttcagtgcacaaatgaagctctggtggatgagatc
atgatgaccttgaagcaggccttcacggtggctgctgtgcagcagacagccaaggcgcca
gcccagctgtgtgagggctgccccctgcagggcctgcacaagctctgcgagcggatcgag
ggaatgaattcttccaaaaccaaactagaactccagaagcacctgacaacattaactaat
caggagcaagcaactatttttgaggaggttcagaaattgagaccaagaaatgagcaacga
gagaatgaattgattatttctttcctgagatgtttatatgaagagaagcaaaaagttcac
atccatattggggagataaaacagacgtcacagattgcagcagagaatattggaagcgaa
ttaccatcaagtgccactcgatttaggctagatatgctgaaaaacaaagcgaagaggtct
ttaacagaatctttagaaagtattttgtctcggggtaataaagccagaggcctccaggaa
cactcagccagtttggatctggacagctccgtgtctagcatgttcagtaacaccagcaaa
gagccgtctggctatgaaaaggaggccttgcccatctccgagagctgcttcaggctcctc
ggctcctcggacgacctgtccagtgactcagagagccaactcacagaagagccagccctg
ctctcgcccaagcagggcttccgaaggcgcgccaacaccctgagtcatgttcccgtggaa
tgccaggagcctccacagctggtgcgagggtctccaggggtctcgcaaaggaaacttgtg
aggtatcactcagtgagcacagagacgcctcatgaacgaaaggactttgagtccaaagcc
gaccacatcagcgatgccagcaggacccctgtgaagacacggagacactcgtggaggcag
cagatcttccttcgggtagccaccccccagaaggcctgcgagtcccccaaaagatacgaa
gattactcagagttgggagagcttcccccacgatctccactagaaccagtttgtgaagat
ggaccctttggcccggtcccagaggaaaagaaaagaacatctcatgaacttcgggagctg
tggcaaaaggccattctacaacagatattgctgctcaggatggagaaagaaaaccaaaaa
ctgcaagcctctgagaatgatttgctgaacaagcgcctaaagcttgattatgaagaaatc
actccctgtcttaaagaagtgactacagtgtgggaaaagatacttagcactccaggaaga
tcaaaaattaagtttgacatggaaaaaatgcactcggctgttggccaaggtgtgccgcga
caccaccggggtgaaatctggaaattcttggcggagcagtaccacctgaagcacccgttt
ccctgcaaacagcagcccaaggacacgccctacaaagagctcttaaagcagctcacctcc
cagcagcacgccattctcatcgaccttgggcgaacctttccaacacatccgtactactct
gctcagctaggagcagggcagctgtcactttacaacatcctgaaggcctactcgcttcta
gaccaagaagtgggctattgccaaggtctcagctttgtagcaggcatcctgctgcttcat
atgggtgaagaagaggcgtttaacatgctcaagtttctgatgtttgacatgggactgcgg
aaacaatatcggccggacatgattattttacagatccagatgtaccagctctcgaggctg
ctccacgactaccacagggacctctacaaccacctggaggagcatgagattggccccagc
ctctatgctgcgccctggttcctcaccgtgtttgcctcacagttccccctgggcttcgtc
gccagagtctttgatatgatctttcttcagggatcagaggtcatatttaaagtggcttta
agtctgctgggaagccataagcccttgattctgcagcatgaaaacctagaaaccatagtt
gactttataaaaagcacactacccaacctgggcttggtgcagatggagaagactatcagt
caggtgtttgagacggacatctcgaaacagttacaagcttatgaagttgagtaccacgtg
cttcaggaagagcttatcgattcttctcctctcagtgacaaccaaagaatggacaaacta
gagaagaccaacagcagcttacgcaaacagaaccttgacctccttgaacagctgcaggtc
gccaatgggaggatccagagcctggaagccactgttgagaagctcctgactagcgagagc
aagctgaagcaggcgaccctggccttggagctggagaggtcagccctgctgcagacggtg
gagcagctccggaggcagacggcagagctgggcagccaggagtctgaccccacactgccc
aagccctcaggtgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (15)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (15)   
   RefSeq(nuc) (13)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (66)   

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