KEGG   Bos taurus (cow): 507699
Entry
507699            CDS       T01008                                 
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha
  KO
K09096  hypoxia-inducible factor 3 alpha
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bta03000]
    507699 (HIF3A)
Transcription factors [BR:bta03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    507699 (HIF3A)
SSDB
Motif
Pfam: PAS_3 PAS_11 HIF-1 PAS PAS_4 PAS_9 HLH PAS_2 SpoVAD
Other DBs
NCBI-GeneID: 507699
NCBI-ProteinID: NP_001098812
BGD-bta: BT26351
Ensembl: ENSBTAG00000018948
VGNC: 29850
UniProt: A7Z028
Position
18:53558971..53590524
AA seq 669 aa
MALGLQRARSSTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLT
ISYLRMHRLCTAGEWNQVGAGGEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLS
QLELIGHNIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLSSRGRTLN
LKAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEPPLQCLVLICEAIPHPGSLEPPLGRGA
FLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAV
TGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRVEETEVVLSLEQTERHS
RRHVQRGSPSQKDAPNPGDRLDTSGPRILAFLHPPALSEAALAADPRRFCSPDLRRLLAP
ILDGTSVAATPSAPPATRRPQSPLPADLPDDLLVDVENAHKVLASGKDLQTVETDLDIAQ
DVDALDLEMLAPYISMDDDFQLNSSEQLPRAYHRPPGAVPRPRARSFHGMSPPTPETSLL
PRWGSDPRLSCSSPSRGDPSASSPMVGARKRALIPSSEDEAEKVELLGIRPPKRSPSLEP
ENFLLPPLSLSFLLTGGPAPGSRQDPSTHLVELNEPLGPGPSLLSLYPDEDTAQPRSHFQ
LAAGLAQAN
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggcgctgggactacagcgcgcaaggtcgagcacggagctgcgcaaggagaagtcccgg
gatgcggcccgcagccggcgcagccaggagaccgaggtgctgtaccagctggcgcacacg
ctgcccttcgcgcgcggggtcagcgcccacctggacaaggcctccatcatgcgcctcacc
atcagctacctgcgcatgcaccgcctctgcaccgcaggggagtggaaccaggtgggagca
gggggcgaaccgctggatgcctgctacctgaaggccctggagggctttgttatggtgctc
accgccgagggagacatggcttacctgtcagaaaatgtcagcaaacacctgggcctcagt
cagctggagctgatcggacacaatatctttgattttatccatccctgtgaccaagaggag
cttcaagatgccctgaccccccggcagagcctgtccaaaaagaagccggaggcccccacg
gagcggtgcttctccttgcgcatgaagagcaccctcagcagccgtgggcgcaccctcaat
ctcaaggcggccacctggaaggtactacactgttctggacacatgagggtctacaagccc
ccggcacagacttccccagctgggagtcccaacttggagccccctctgcaatgcctggtg
ctaatctgtgaagccatcccccaccctggcagcctggagccccccttgggccgaggggcc
ttcctcagccgccacagcctggacatgaagttcacctactgtgatgagaggatcgcggag
gttgccggctacagccccgacgacctgattggctgttctgcctacgagtacatccacgcg
ctggactcggatgcagtcggccagagcatccatacgttgctgagcaagggccaggcagta
acggggcagtaccgcttcctggcccggagtggtggctacctgtggacccagacccaggcc
acagtggtgtcagggggccggggtccccaatctgagagtatcgtctgcgtccacttcctg
atcagccgagtggaagagaccgaagtggtgctgtccctggagcaaacggagcgacactct
cgcagacacgttcagcggggcagcccctctcagaaggatgcccctaatcctggggacaga
cttgacacctctggtccccggatcctggctttcctgcacccccctgccctgagtgaggcc
gccctggccgctgaccctcgtaggttctgtagccctgacctccgtcgcctcctggcacca
atcctggacgggacttcagtagccgctacccctagtgcacccccagccacacggcgcccc
cagagtcctcttccggctgatctcccagatgatctccttgtggacgtggagaatgcacac
aaagtcttggcctctgggaaagacctgcagacagtggagacagatctagatatcgctcag
gacgtcgatgctctggatttggagatgctggccccctacatctccatggatgatgacttt
cagctcaactccagcgagcagctacccagggcctaccacagacctccaggggctgtcccc
cggccccgtgctcggagcttccacggcatgtcgcccccaacccctgagacctccctgctg
ccccgctgggggagtgacccccggctgagttgctccagcccttccagaggggatccctca
gcatcctcccctatggttggggctcggaagagggccctgatcccgagctcagaagacgag
gcagagaaggtggagctcctgggcatcaggcccccgaaacgatcccccagcctagaaccc
gaaaacttcctgttgcctcccctcagcctgagcttccttctgacaggaggaccagcccca
gggagccggcaggatcccagcacccaccttgtggaactgaatgagcccctgggcccgggc
ccctccctgctctctctctacccggacgaggacacggcccagcccaggagccactttcag
ctagcggcaggcttggcccaggccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (12)   
   RefSeq(nuc) (4)   
   GenBank (4)   
   EMBL (4)   
Protein domain (9)   
   Pfam (9)   
All databases (45)   

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