KEGG   Bos taurus (cow): 510497
Entry
510497            CDS       T01008                                 
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
  KO
K05648  ATP-binding cassette, subfamily A (ABC1), member 5
Organism
bta  Bos taurus (cow)
Pathway
bta02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    510497 (ABCA5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bta02000]
    510497 (ABCA5)
Transporters [BR:bta02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA5, 6, 8, 9, 10 subgroups
    510497 (ABCA5)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 RsgA_GTPase AAA_29 AAA_16 AAA_23 nSTAND3
Other DBs
NCBI-GeneID: 510497
NCBI-ProteinID: XP_024836866
BGD-bta: BT27531
Ensembl: ENSBTAG00000002747
VGNC: 25459
Position
19:61281179..61344147
AA seq 1642 aa
MATAVREDGVWRQTRTLLLKNYLVKCRTKKSSAQEILFPLFFLFWLILISMMHPNKKYEE
VPDVELSALDASVLTNVVLGFTPATNITRSVMQKVSVDHLLDVVTIEEYADEKELVTSSL
SKSDTFVGVVFKDFMSYELRFFPDTIPVSSVYMDSRAGCSPSCDAVQFWSSGFTVLQASI
DAAIIQMKTNVSFWKELESTKAVLMGETAVVEIDTFPRGVILIYLVIAFSPFGYFLAIHI
VAEKEKKLKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASSLFPQSSCFVIF
LLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFLVTVAFGFVGLLIVLMESFPPSLVWLLS
PFCQCTFLIGIAQVMHLEDVDEGALVSNLTEGPCPLIIAIMMLILNSIFYALLAVYLDQV
VPGEFGLRRSSFYFLKPSYWSKSKRNYKELSEGNVNGNVSFSEIVEPVSSEFIGKEAIRI
SGIQKTHRKKGENVEALRSLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSEGFASI
YGHRVSEIDEMFEARKMIGICPQLDIHFDVLTVEENLSILASIKGIPANDVIQEVQRVLL
DLDMQAVKDNQAKKLSGGQKRKLSLGIAVLGNPKVLLLDEPTAGMDPCSRHIVWNLLKHR
KANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYIDRYCAT
ESLSSLVKQHIPAATLLQQNEQQLVYSLPFKDMDKFSGLFSALDSHSDLGVISYGVSMTT
LEDVFLKLEVEAETDQADYSVFSQQPQEEELDSKSFDEMEQSLLILSESKAALVSAKGLW
TQQVFTIARFHFLNLRRESKSLRSVLLLLLIFFTVQIFMFLVHHSLKNAVVPIRLVPDLY
FLKPGDQPDKYRTSLLLQNSTDSDISDLLSFFANQNIMVTMFNDTDYMSAAPHSAALNVV
RSERDYVFTAVFNSSMVYSLPVLMNIISNYYLYHSNVTESIQVWNTPFFQEITDIVFKIE
LYFQAALLGVIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWLGQAIVDIPLFFVV
LTLMIASLFAFHYGLYFYAVKFLSVVFCLIGYVPSVVLFTYITSFTFKKIANTKEFWSFI
YSVTALACIAVTEITYFMGNTATIILHYIFCITVPIYPLLGCLIGFIKITWKNLQRNEDT
YDPWDSLLVAVISPYLHCVLWVFLLQYYEKKYGGRSLRKDPFFRTLSTKSKHRKFSEPPN
NEDEDEDVKAERLKVKELMSCQCCEEKPAIMVNNLHKEYEDKKDFLPTRKVKKVANKYVS
FCVKKGEILGLLGPNGAGKSTIINILVGDIEPTSGQVFLGDYSPHPAEDDDSVRCMGYCP
QINPLWRDITLQEHLQIYGAVKGMRASDVQEVTDRITNALDLKEHLQKTVKKLPAGIRRK
LCFALSMLGNPPVTLLDEPSTGMDPKAKQHMWRAIRTAFKNRKRAAILTTHYMEEAEAVC
DRVAIMVSGRLRCIGTVQHLKSKYGKGYFLEIKLKDWIEDLEVDRLQREVQCIFPNASRQ
ESFSTILAYKIPKEDVQSLSQSFSKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEED
NSCGTFNSTLWWERTQEDRVVF
NT seq 4929 nt   +upstreamnt  +downstreamnt
atggcgactgcagttcgggaagacggggtctggaggcagacgagaacgctgctcctcaag
aattacctggtgaaatgcaggaccaagaagagcagtgctcaggaaattctttttccactg
ttttttttgttttggttaatattaattagcatgatgcatccaaataagaaatatgaagaa
gtgcctgatgtagaactcagtgccctggacgcgtccgtcctcaccaacgtcgtgcttgga
ttcacgcccgcgactaacatcacgaggagcgtcatgcagaaagtgtctgtggatcacctt
cttgacgtcgtaactattgaagaatatgcagatgaaaaagaattggtaacatctagtctt
tccaagtctgacacctttgtaggcgttgtgttcaaagacttcatgtcctacgagctccgg
ttttttcctgatacgattccagtatcttctgtttatatggattcaagagctggctgttcc
ccatcgtgtgacgccgtccagttctggtcctcagggttcacagttctgcaggcctcgata
gacgcagccatcatacagatgaagaccaatgtttctttttggaaagagctggagtcaact
aaagctgttcttatgggagaaacggctgttgtagaaatagacacctttccccgaggagta
attttaatatacctagttatagcattttcaccttttggatactttttggcaattcatatc
gtagcagaaaaagagaagaagttaaaagagtttttaaagataatgggacttcatgacacg
gccttttggctttcctgggttcttctctacacaagtttgatttttctcatgtcccttctc
atggcagtcatcgcaacagcgtcttccttattccctcagagtagctgctttgtgatattt
ctcctttttttcctctatggcttatcatccgtgttttttgctttaatgctgacgcctctt
tttaaaaaatcaaagcatgtgggaatagttgaatttttagtcaccgtggcttttggattt
gttggcctcttgatagtcctcatggaaagtttccccccatcgttagtgtggctcctcagt
cccttctgtcagtgcactttcctgattggcatcgcacaggtcatgcatttagaagacgtt
gatgaaggtgctttagtttctaatttgactgaaggcccgtgtcctctaatcattgctatt
atgatgctgattcttaacagcattttctacgccctcttggctgtttatcttgatcaagtt
gttccaggagaatttggcttacggagatcatcattttattttctgaagccatcatattgg
tcaaagagcaaaaggaattataaggagttatcagagggcaacgtgaatgggaatgttagt
tttagtgaaattgttgagcctgtttcttcagaatttataggaaaagaagccatcagaatc
agtggtattcagaagacccacagaaagaaaggtgaaaatgtagaggctttgagaagttta
tcatttgacatatacgagggccagatcactgccctgcttggccacagcggaacaggaaag
agcacactgatgaatattctgtgcgggctgtgcccgccctcagaggggttcgcatccata
tatggacacagagtctcagaaatagatgaaatgtttgaagccaggaaaatgattggcatt
tgtccacagctagacatacactttgatgtcctgacggtagaggaaaacttgtccattttg
gcatcaatcaaaggaataccagccaatgatgtcatacaggaagtgcagagggtcttactg
gatttagacatgcaggctgtcaaagataatcaggctaaaaagttaagtggtggccaaaaa
agaaaactgtctttaggaatcgctgttctcgggaacccaaaggtgctgctgttggacgag
ccaacagctggaatggacccgtgttctcgtcacattgtctggaatcttctgaaacacaga
aaagcgaaccgggtgacagtgtttagcactcacttcatggatgaagccgacattcttgct
gataggaaggctgtcatatcacaaggaatgttaaaatgtgttggttcttcaatttttctc
aaaagcaaatggggaattggctaccggctgagcatgtacatagacagatactgtgccaca
gaatctctttcttctctggttaaacaacatatacctgcggccactttgttgcaacagaat
gagcagcaacttgtgtacagcttgcctttcaaggacatggacaaattttcaggcttattt
tctgctctagacagtcattcagacttaggtgttatttcttatggtgtctccatgacgact
ttggaagatgtattcttaaagctagaagttgaagcggaaactgaccaagcagattacagc
gtgttttctcagcagccgcaagaggaagagttggattcaaaatccttcgacgagatggaa
cagagcttgcttattctctccgaaagtaaggctgctctggtgagcgccaagggcctctgg
acgcagcaggtgtttaccatcgccaggtttcacttcctcaacttgagacgcgaaagcaag
tccctgagatctgtgttgctcttacttttaatatttttcacagttcagattttcatgttt
ttggtacatcactctttgaaaaatgctgtggttcccatcagacttgttccagacttatac
ttcctcaaacccggagatcaacccgataaatacagaaccagtctgctccttcagaactcc
actgactcggatatcagtgaccttcttagctttttcgcaaatcagaacataatggtgacg
atgtttaatgacactgactacatgtccgccgctccccacagcgcagctctgaacgtggtg
cggtcagaaagggactatgtttttactgctgttttcaacagctctatggtttactcttta
cccgtgttgatgaatatcattagtaactactatctttaccattcaaacgtcactgaaagc
atccaggtctggaataccccattctttcaggaaatcacagacatcgttttcaaaatcgag
ctgtacttccaagcagctttacttggggttattgttaccgcaatgcctccttacttcgcc
atggaaaatgcagagaatcacaagatcaaagcttatactcagcttaagctctcaggtctc
ctgccttctgcatattggctcggacaggctattgttgacatccccttattttttgtggtc
cttactttgatgatagccagtttgtttgcatttcattatggattatatttttatgctgtc
aagttcctttctgtggttttttgccttatcggttatgttccatccgttgttctgtttacc
tacattacgtctttcacctttaaaaaaattgcaaataccaaagaattttggtcatttatc
tattctgtgacagcattggcgtgcattgcagtcactgaaataacttacttcatgggaaac
acagctacaattattcttcattatatcttttgcattactgttccaatctatccgcttctt
ggttgcctgattggtttcataaagattacttggaagaatcttcagagaaatgaggacacc
tacgacccgtgggatagccttctggtggctgttatatcgccatacctgcactgtgtgctg
tgggtttttctcctgcagtactacgagaaaaaatatggtggcagatcattaaggaaggat
ccctttttcaggactctttcgacaaagtccaaacacagaaagttttcagaaccacccaac
aatgaggatgaagatgaagatgtcaaagctgaaaggctgaaggtcaaagagctgatgagc
tgtcagtgttgcgaggagaaaccagccattatggtcaataatctgcataaagaatatgaa
gacaagaaagattttcttcctacaagaaaagtaaagaaagtggcaaataaatatgtctcc
ttctgtgtgaaaaaaggagagatcttgggactgttgggtccaaatggcgcaggcaaaagc
acgattattaatatcctggttggtgacattgagccaacttcaggccaggtcttcctagga
gactactctccacacccagctgaagacgacgactccgtgaggtgtatgggctactgtccc
cagatcaaccccctgtggcgagacatcaccctgcaggagcacctccagatctatggagct
gtgaaagggatgagagccagtgatgtgcaggaggtcacagatcgaataacaaatgcactt
gatctaaaagaacacctgcagaaaacagtgaagaaacttcctgcaggaatcaggcgcaag
ctgtgtttcgccctgagcatgctggggaaccccccggtcacgctgctggatgagccgtcc
acaggcatggatcccaaagccaagcagcacatgtggagagcgattagaaccgcattcaaa
aacaggaagcgggccgctattctgaccactcactacatggaggaggcggaggccgtctgc
gaccgtgtggccatcatggtgtccgggcggctgaggtgtattgggacagtccagcatctg
aagagtaaatatggaaaaggatactttttggaaatcaaattaaaggactggatagaagac
ctggaagtagaccgtcttcaaagagaagttcagtgtattttcccaaacgcaagccgtcag
gaaagtttttctactattctggcttataaaattcctaaggaagacgttcagtccctttca
cagtctttttctaagctggaagaagctaaacatacattcgctattgaagagtacagcttt
tctcaagcaacgttggaacaggtttttgtggaactcacgaaagagcaagaggaggaagac
aacagctgtggcaccttcaacagcacactctggtgggaaaggacgcaggaggacagagtc
gtgttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (62)   

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