KEGG   Bos taurus (cow): 515127
Entry
515127            CDS       T01008                                 
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42
  KO
K14321  nucleoporin-like protein 2
Organism
bta  Bos taurus (cow)
Pathway
bta03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    515127 (NUP42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    515127 (NUP42)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     515127 (NUP42)
SSDB
Motif
Pfam: zf_CCCH_4 zf-CCCH_4 zf-CCCH zf-CCCH_2 JetA DinI
Other DBs
NCBI-GeneID: 515127
NCBI-ProteinID: NP_001071391
BGD-bta: BT23725
Ensembl: ENSBTAG00000016014
VGNC: 32368
UniProt: Q2YDG6
Position
4:31829672..31844067
AA seq 420 aa
MTICQFFLQGRCRFGDRCWNEHPGPRGAGGGRQQQPSGSNRRGWNTTNQRYSSVIQPSSF
SKPTPWGGSRDQEKPSFATFDSGESASKNRGFGLSQNPFASPGSDDQKDDKKLLEGIVKD
MEVWESSGQWMFSSYSPVKKKPNISGFTDISPEELRLEYHNFLTSNNLQSYLNSVQQLIN
QWRNRVNELKSLNTSTAIALLSDLQDGVNQATPSFGFGNRQTVTFGSPGFPVNNSSSNSA
QNFSFKPSPGFATAPSGSPPVFGNTPAFGAVPAASSAIAAATPTFGLRKPEITSAASFSF
KTPAASGFGSSGFSGFSPSMAASPVGSPVAPAFGSGSSVAGFGSPGSQPHTAFSKSSSDT
FGNSSIPTSLSFSLGSTSTDNALFTPKDQLTAEELEQFQSKKFALGKIPLKPPPVEFLNI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaccatttgtcagttcttccttcaaggccgctgccgcttcggagaccggtgctggaac
gaacatcccggccccaggggtgccggcggaggacggcagcagcagccctcaggtagtaac
agaagaggatggaataccaccaatcagagatattccagtgttatccagccatccagtttc
tccaagcctacaccatgggggggcagcagagatcaagaaaagccatcttttgctactttt
gattctggagagtctgctagcaagaacaggggatttggcttatctcagaacccatttgct
tcacctggctctgatgaccagaaagatgataagaagcttctggaaggaattgttaaagat
atggaggtttgggaatcatcagggcagtggatgttttcttcttattctccggtgaaaaag
aaaccgaatatttcaggttttacagacatttcaccagaggagttgagacttgaataccat
aacttcttaaccagcaataacttacagagttatctaaattctgtccagcagttgataaat
cagtggaggaacagggtgaatgaactgaaaagtctaaatacatcaactgcaatagctttg
ctgtccgatttacaggatggagtgaatcaagcaacaccttcatttggatttggcaatagg
caaacagtaacatttgggtcaccaggttttcctgtgaataacagcagcagcaacagtgct
cagaattttagttttaaaccaagccctggatttgctacagccccttctggaagccctcct
gtgtttgggaatactccagcgtttggagctgtacccgctgccagttctgccattgctgct
gctactccgacttttggccttaggaaacccgaaatcacatctgctgcttcattttcattt
aaaacccctgcagcttctggttttggatcatctggattttcaggattttcaccttctatg
gcagcaagccctgttggatctccagtggccccagcctttggaagtggcagttctgtagct
ggttttggtagtccaggctcacagcctcacactgctttctctaagtcatccagtgacacc
tttggaaacagcagcatacctacttctctctcattctcacttggcagcacctcaacagat
aatgcattattcacacccaaggatcaactaacagcagaagaactggaacagtttcaatcc
aagaaatttgctctgggaaaaattccattaaagccaccacctgtggaatttctaaatatt
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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