KEGG   Bos taurus (cow): 515602
Entry
515602            CDS       T01008                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
bta  Bos taurus (cow)
Pathway
bta03030  DNA replication
bta03410  Base excision repair
bta03420  Nucleotide excision repair
bta03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    515602 (RFC3)
   03410 Base excision repair
    515602 (RFC3)
   03420 Nucleotide excision repair
    515602 (RFC3)
   03430 Mismatch repair
    515602 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bta03032]
    515602 (RFC3)
   03036 Chromosome and associated proteins [BR:bta03036]
    515602 (RFC3)
   03400 DNA repair and recombination proteins [BR:bta03400]
    515602 (RFC3)
DNA replication proteins [BR:bta03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    515602 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    515602 (RFC3)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    515602 (RFC3)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     515602 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    515602 (RFC3)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA Rad17 DNA_pol3_delta AAA_22 AAA_16 ABC_tran zf-HC2 AAA_2 Sigma54_activ_2 AAA_11 ATPgrasp_ST AAA_19 DUF2247
Other DBs
NCBI-GeneID: 515602
NCBI-ProteinID: NP_001033636
BGD-bta: BT15463
Ensembl: ENSBTAG00000010787
VGNC: 33887
UniProt: Q2TBV1
Position
12:complement(27378916..27396140)
AA seq 356 aa
MSLWVDKYRPCSLGQLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ
LETSSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL
AVRVPAPSIEDICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPF
TADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL
HNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMIF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctctgggtggacaaataccggccctgctccttgggacagctagactatcacaag
gagcaggcggcccagctgcgcaacctggtacaatgtggtgactttcctcatctgttagtg
tatggaccatcaggtgctggaaaaaagacaagaattatgtgtattctacgtgaactttat
ggtgttggagtggaaaaattgagaattgaacatcagaccatcacaactccatcgaaaaag
aaaattgaaattagcactattgcaagcaattaccaccttgaagttaatcctagtgatgct
ggaaatagcgatcgggtagtaattcaggagatgttgaaaacagtggcacaatcacagcaa
cttgaaacaagctctcaaaaagattttaaagttgtgttattgacagaagttgacaaactc
actaaagatgctcaacatgccttgcgcagaaccatggaaaagtatatgtccacctgcaga
ttgatcttgtgttgcaattctacgtctaaagtgataccacctattcgtagtaggtgcctt
gcagttcgtgtgcctgctcccagcattgaagatatttgccatgtgttatctactgtgtgt
aagaaggagggtctaaatcttcctccacaactggctcatagacttgccgagaagtcctgc
agaaatctcagaaaagctctgcttatgtgtgaagcctgcagagtgcaacaatatcctttt
actgcagatcaagaaatccctgaaacagattgggaggtgtatctgagggagactgccaat
gctattgtcagtcaacaaactccacagaggctccttgaagttcgtggaagactgtatgag
cttctaactcactgtattcctcctgaaataataatgaagggccttctctcagaactttta
cataattgtgatggacaactgaaaggagaagtggcccagatggcagcttactatgaacat
cgtctacaactgggtagcaaagccatttatcacttggaagcgtttgtggccaaatttatg
gcactttataagaagttcatggaggatggattggaaggcatgatattctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (41)   

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