KEGG   Bos taurus (cow): 530159
Entry
530159            CDS       T01008                                 
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bta03016]
    530159 (CDKAL1)
Enzymes [BR:bta01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     530159 (CDKAL1)
Transfer RNA biogenesis [BR:bta03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    530159 (CDKAL1)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM
Other DBs
NCBI-GeneID: 530159
NCBI-ProteinID: NP_001179620
BGD-bta: BT17608
Ensembl: ENSBTAG00000025589
VGNC: 27137
UniProt: A0A3Q1M3S9
Position
23:complement(36732612..37472417)
AA seq 578 aa
MPSASCDTFLNDIEDIVSQEDSKPQDRHFSRKHVVPKVRRRNTQKYLQEENSPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDR
AKQSFQEGVCEIWLTSEDTGAYGRDIGSSLPALLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILHHPRVYAFLHIPVQSASDTVLMEMKREYCVADFKRVVDFLKDKVPGITIATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKELS
RIFHSYNPYDHKIGQRQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPTFMGKMVEVDIYE
SGKHFMKGQPVSDAKVYTPSISKPLARGEVSGLTEEFRNRLGNHLNSVPHTSAANRRESA
SSRMVLRLQRLHQDFALKMSVGLALFALLFALLVKVYN
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgccttctgcatcctgtgatacattcctgaatgacatagaagatattgtgtcgcaagaa
gattcaaagccgcaagacaggcatttttcgagaaagcacgttgttccaaaggtgcgaagg
cgaaatacccaaaagtatctgcaagaggaaaacagtcccccaagtgatagcactattcca
ggcatacagaaaatttggatacgaacttggggttgttctcataataattcagatggagaa
tacatggctggacaactggctgcttatggatataaaattacagaaaatgcatcagatgca
gacttatggctcctgaatagttgtactgtaaaaaatccagctgaagaccactttagaaac
tcaattaaaaaagctcaagaggagaataagaaaatagtgcttgctggctgtgttcctcaa
gcccagcctcgtcaggattacctcaaagggctgagcatcatcggggttcaacagatagat
cgtgtagtagaagttgtggaggaaacaattaaaggtcactctgtgagactgttgggtcag
aaaaaggataatggaaaacgtttggggggagcacgactggatttgccaaagattaggaag
aatccactcatcgaaatcatttccatcaatactgggtgtctcaatgcttgtacctactgc
aaaactaaacatgccagaggaaatttggccagttacccaattgatgaattagtagataga
gccaaacaatcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacgggg
gcttacggcagagatattggctccagcctcccggccctgctgtggaagctggttgaagtg
attcctgagggagcgatgctgaggctgggcatgaccaatccaccctatattttagagcac
ctggaggaaatggcaaaaatccttcatcacccccgagtctatgcttttctgcacatacca
gttcagtctgcctctgacactgtgctcatggaaatgaaaagagaatactgcgtggctgac
ttcaaaagagtggtggattttctgaaagacaaagttcctggaataactattgctacagat
attatctgtggttttcctggagaaacagaccaagattttcaagaaacagtgaaacttgtt
gaagagtacaaatttccaagtctctttattaaccagttttacccaagaccaggaactcct
gctgcaaaaatggaacaagttccagcacaagttaaaaaacaaagaacaaaagagctctct
cggatatttcattcgtacaatccatacgatcacaagattggtcagagacaacaagtgtta
gtcacggaagaatcttttgattccaagttttatgttgcgcacaatcgattctacgagcag
gttttagtgccaaagaaccccacattcatgggaaaaatggtcgaagtggacatttatgaa
tcaggaaaacattttatgaaggggcagccagtttcagacgcgaaagtatacacaccatcc
atcagcaaaccattagcaagaggagaagtctcgggtttaacagaggaattcagaaatagg
cttgggaatcacctgaattcagtaccccacacctcagctgcaaatcgacgcgagtcggcc
agttcccgaatggtgctacgattgcaaagactacaccaggactttgcactgaagatgtct
gtgggcctggctctgtttgctcttctttttgcgcttttggtcaaggtctataattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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