KEGG   Bos taurus (cow): 530961
Entry
530961            CDS       T01008                                 
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
  KO
K10683  BRCA1-associated RING domain protein 1
Organism
bta  Bos taurus (cow)
Pathway
bta03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    530961 (BARD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    530961 (BARD1)
   04121 Ubiquitin system [BR:bta04121]
    530961 (BARD1)
   03036 Chromosome and associated proteins [BR:bta03036]
    530961 (BARD1)
   03400 DNA repair and recombination proteins [BR:bta03400]
    530961 (BARD1)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     530961 (BARD1)
Ubiquitin system [BR:bta04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    530961 (BARD1)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     530961 (BARD1)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     530961 (BARD1)
SSDB
Motif
Pfam: zf-RING_6 Ank Ank_4 Ank_2 Ank_5 Ank_3 BRCT BRCT_2 zf-RING_5 zf-C3HC4 zf-C3HC4_2 zf-rbx1
Other DBs
NCBI-GeneID: 530961
NCBI-ProteinID: NP_001179630
BGD-bta: BT19095
Ensembl: ENSBTAG00000033690
VGNC: 26420
Position
2:complement(102759233..102854290)
AA seq 772 aa
MQGNRQPRVRSGNQPHPAPAMKPAGRGAWAHSRAALDRLEKLLRCSRCTNILREPVCLGG
CEHIFCSNCVSDCIGSECPVCYTPAWIQDVKINRQLDSMIQLCSKLQNLLHDTDLSDLKE
KTSRKSLFNDAQSKKNSIKMWFSPRSKKVRYTVSKLSVQTQPSVKNDENAQQTSMYEFVS
PSPPVEVSEGPKKPSTRSRKKQKKKTLAEVNRKWNLEAEKEDGDLDCKGESKEKLVSFCS
QPSVIANLQINGEIDLLASGSVTESECLDEVFLPLAEHIESPEIESKNEVVTPEKTVSAN
YLPSKKSLPSGRNGKRGRHNRISSPVSKRCRSSSQSTGGNSVKQTVLLENMPLLGCSSPP
SNKLKVGDTLSRNSRTILDESISLSPGTPPSTLNSPSYRRMMCSPSATKLWPISHTAVKR
NHRGETLLHIASIKGDIPSVEYLLQSGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK
ALVNTTGYQNDSPLHDAVKNGHVDIVKLLLTYGASREAVNIFGLRPVDYADSENMKSLLL
LPEKEEISSLSHSVVNTGQRRDGPLVLIGSGLSSEQQKMLSELATILKAKKCAEFDGTVT
HVIVPGDTVQSTLKCMLGILSGCWILKFEWVKACLQSKECEQEEKYEIPEGPQKSRLNRE
QLLPKLFDGCYFYLGGTFKHHPKDNLIKLVAAGGGQILIRKPKPDSDVTQSINTVAYHAK
PDSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDN
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgcaggggaaccggcagccgagggtccgctccgggaaccagcctcatcccgcgcccgcc
atgaagccggccggtcgcggggcctgggcccacagccgcgccgcgcttgaccggctggag
aagctgctgcgctgctcacgctgcactaatattctgagggagcctgtgtgcttaggcgga
tgtgagcatatcttctgtagtaattgtgtaagtgactgcatcggaagtgaatgtccagtg
tgttataccccagcctggatacaagatgtgaagataaacagacagctggacagcatgatc
cagctgtgtagtaagcttcagaatttgctgcacgacactgatctttcagatttgaaagaa
aaaacatctaggaagagtttatttaatgatgcacaaagtaagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaagtcagatatactgtgagtaaactttcagtgcaaacc
cagccttctgtgaaaaatgatgaaaatgctcagcagacctccatgtacgaatttgtctct
ccgagccctccggtggaggtttctgagggacctaagaagccttccacaagatctagaaaa
aaacagaaaaagaaaactttagctgaagtcaaccgaaaatggaatttagaggcagaaaag
gaagatggtgaccttgactgcaaaggggaaagtaaggaaaagctggtatccttctgtagc
caaccatctgtgattgctaacctgcagataaatggtgaaatagacttactagcaagtggg
tctgtaacagaatctgaatgcttagatgaagtctttttaccattggctgagcatatagag
tctccagaaattgagagcaagaatgaagtagtgactcctgagaagacagtctctgcaaac
tatcttccttccaagaaatctttgccatcaggtcgtaatgggaagcgtgggcgtcacaac
agaatttccagtcctgtttctaagagatgcagaagcagcagtcagagcactggtggaaac
tctgttaagcaaacagtgctcttagaaaacatgccattgcttggctgttcttcaccacct
tcaaacaaacttaaagttggtgacacattaagtaggaatagccgtactatattggatgaa
tccattagcctttcaccaggtacaccaccttctacactgaacagtccaagttacagacga
atgatgtgtagcccctcagcaacaaagctgtggcccattagccatacagctgtgaagaga
aatcatcgaggagagactttgctccatattgcttcaattaagggcgacatcccttctgtt
gaatacctcttacaaagtggaagcgacccaaatgttaaagaccatgctggatggacacca
ttgcatgaagcctgcaatcacgggcacctgaaggtggtggagttgctgctccagcacaag
gcgttggtgaacaccactgggtatcagaacgactcgcctcttcatgacgcagtgaagaac
gggcatgtggacattgtcaagctgttactcacctatggcgcctccagggaggcagtcaac
atatttggtctgcggcctgtggattatgcagacagtgaaaatatgaaatcactgttgctg
ctaccggagaaggaagagatctctagtctctcccattctgttgtaaacactggtcagcgt
cgggatgggcctcttgtacttataggcagtggactttcttccgaacaacagaaaatgctc
agtgagcttgcaacgattcttaaggctaaaaaatgtgccgagtttgacggtacagtaact
catgtcattgttcctggtgatacagttcaaagcaccctgaaatgtatgcttggaattctc
agtggatgctggatcctaaaatttgaatgggtgaaagcatgtctacaaagcaaagaatgt
gaacaggaagaaaagtatgaaattcctgaaggaccacagaaaagcaggctcaacagagaa
cagctgttgccaaagctgtttgatggatgttacttctatttggggggaaccttcaaacac
catccaaaggacaaccttattaagcttgtcgctgccggtgggggccagatcctcattaga
aagcccaagccagacagtgacgtgactcaaagcatcaatacagtcgcgtaccatgccaaa
cctgattctgatcagcgcttctgcacacagtatatcatctatgaggacttgtctaatcat
cgcccagaaagggttcggcagggcaaagtctggatggctccttccagctggtttatagat
tgtgtgatgtcctttgagttgctccctcttgacaactga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (49)   

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