KEGG   Bos taurus (cow): 531362
Entry
531362            CDS       T01008                                 
Symbol
RPAP1
Name
(RefSeq) RNA polymerase II-associated protein 1
  KO
K20826  RNA polymerase II-associated protein 1
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bta03021]
    531362 (RPAP1)
Transcription machinery [BR:bta03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     531362 (RPAP1)
SSDB
Motif
Pfam: RPAP1_C RPAP1_N THOC2_N
Other DBs
NCBI-GeneID: 531362
NCBI-ProteinID: NP_001071452
BGD-bta: BT30449
Ensembl: ENSBTAG00000001693
VGNC: 34098
UniProt: A0JN53
Position
10:complement(36938820..36955509)
AA seq 1395 aa
MLSRPKPGESEVDLLRFQSQFLAAGATPAVQLVKKGSRRAGDANLEQPPLQDHRDVVMLD
SLPDLPPALVPAPPKRARPSPGHLLPEHEDPEERLHRHDQHITAVLTKIIERDTSSMPVN
LPVSSGVAFPPVFHRSQGRQGKPVTAGKRSIFAQEIAARRASGAKVSPVREVESILDPPE
SAMTCEALTPREWGSQPPWNSYSFQGPHLVTGKGLKGQEAEQEAQTIHEENVARLQALAP
EEILQEQQRLLAQLDPSLVAFLKSHSCTREQAEEKATREQRPGRPSAEVIGKEAIAPTSA
SVPRQENELEPETPALALPVTPQKEWLHMDTVELEKLHWTQDLPPLRRQQTQERMQARFS
LQGELLAPDMDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVIGR
AQAGEFGDRLVGSVLHLLLDAGFLFLLRFSLDDRVDGVIAAAVRALRALLVAPGDEELLD
STFSWYHGALMFALMPSQEDKEDEDEDEEPPAEKAKTKSPEEGNRPPSDLARHDIIKGLL
ATNLLPRLRYVLEVTCPGPSVVLDILTVLIRLARHSLESATRVLECPRLVETVVREFLPT
SWSPMGSGPTSSLHRVPCAPAMKLLRVLASASRNIAARLLSGFDLRSRLSRFIAEDPQDL
ALPLEEAETLSTEAFRLWAVAASYGLGSDLYRELYPVLMQALQDVPKELSSPPPRPLAVQ
RIASLLTLLTQLTLAAGHIAPEHNSHSAEASLLAGSSSVTWTQVSGLQPLVEPCLRQTLK
LLPRPEMWSALGPVPTACLLFLDAYYQAWSQQPGLCPEDWLQDMERLSEGLLLPLLKHPS
LGSLWDSLGCCSPLCNPQSCAVAPETISSLASLGCAGGHPPLSLAGSASPFPFLTALLSL
LNTLGRIHKGLCGQLATVLAAPGLQDYFLRCVAPVAALHLTPFSAWALRHEYHLQYLALT
LAQRAATLQPPMSGTDAALCHGMALALLGRLLPGSEHLAHELMLSCVFRLEFLPERASGG
PEAADFSDRLSLGSGGDLGCGRGALLAQACQDLPSIRSCYLTHCSLARASLLASQALYRG
ELQRVPALLLPVPKEPLLPTDWPFLPLIQLYHRASDTPSGLPPADTVGTALRALQWVLVL
ESWRPRALWAVSPAARLARLMCVFLVDSELFRETPIQRLVAALLARLCQPEVLSNLNLDC
PLPGLTSFPDLYANFLEHFEAVSFGDHLFGALILLPLQRRFSVTLRLALFGEHVGALRAL
GLPLTQLPVSLECYTAPPEDNLALLQLYFRALVTGALRPRWCPVLYAVAVAHVNSFIFSQ
DPNNSDEIKAACRSMLQKTWLLTDEGLRQHLLHYKLPNSALPEGFELYPQLPPLRQQYLQ
KLRISGVLPNGVSDT
NT seq 4188 nt   +upstreamnt  +downstreamnt
atgctgtcaagaccaaagccaggggagtcggaggtggacctgctgcgcttccagagtcag
tttcttgcagctggtgcaaccccagcagtacagctggtgaagaaaggaagcaggagagct
ggggatgccaacctggagcagcctccactgcaggatcatcgggatgtggtgatgctagac
agtctcccagatttacccccagctttggttcctgctcccccaaagagagccaggcccagc
cctggccatctcctgcctgaacatgaggaccctgaagagaggctgcacaggcacgatcag
cacatcactgctgtcttgactaagattattgaacgagatacaagttcaatgcctgtgaat
ctgcctgtgtccagtggcgttgctttccctcctgtattccatcgctcacaggggagacag
gggaagccagtgacagctggtaagagaagcatctttgcccaggaaattgcagcaaggaga
gcatctggagccaaggtctcaccagttagagaagttgaatctatcttggacccaccagag
agtgctatgacctgtgaggcacttacacctagggagtggggcagccagcctccatggaac
agctacagcttccagggaccccatctggtaacagggaaggggctcaagggccaggaggct
gagcaggaagcccagaccatccatgaagaaaacgtagcgagactgcaagccctggctccg
gaggagatcctgcaggaacagcagcgattgctggctcagcttgatcccagcttggttgcc
ttcttgaaatctcacagctgtacccgtgagcaagcagaagagaaggccacaagggagcag
agaccaggaagaccctctgctgaggtcattggaaaggaggccattgcaccaacttctgcc
agtgtgcccaggcaggaaaatgagctggagccagaaaccccagctctggccttgcctgtg
actccccagaaagaatggctgcacatggacactgtggagctggagaagctccattggacc
caggacctgcctccactccggcggcagcagacgcaggagaggatgcaggcccgattcagc
cttcagggagagctgctggcccccgacatggaccttcccacccatctgggcctgcaccac
catggagaggaggcggagagagcggggtactcccttcaggagctcttccacctgacgcgc
agccaggtgtcccagcagagagccctagcgctgcacgtgttagcccaggtcatcggcagg
gcccaggctggggagtttggggaccggctggtgggcagcgtcttgcacctccttctggat
gccggtttcctcttcctgctgcgcttctccctggatgacagggtggatggggtcatcgca
gctgctgtccgggctcttagggccctgctggtggcccctggagatgaggagctcctcgac
agcaccttctcttggtaccacggagcactgatgttcgctctgatgcccagccaggaggac
aaggaagatgaggatgaggacgaagaacccccagcagaaaaggcaaaaactaagagtcct
gaagaaggaaaccggcctccatctgacctggcccgacatgacatcatcaaggggcttctg
gctaccaacctgctgcctcggctgcgctacgtactggaggtgacctgcccaggaccttct
gtggtccttgacatcctgactgtgctcatccgcctggcccggcattccctggagtcagcc
acaagggtgctggagtgccctcggctggtagagactgtggttcgagagttcctgcccacc
agctggtcccccatggggtcggggcctacctccagtctacacagagtgccctgtgctcct
gccatgaagctgcttcgtgtcctggcctcggccagtaggaatattgctgcccggctgctg
agcggctttgatctccggagccgcctgagccgctttatagcggaagacccccaggatctg
gccttgcccctggaagaagccgagacactgagcactgaggccttccgcctgtgggcagtg
gcggcctcctatggcctaggcagcgacctttacagggaactataccctgtgctgatgcaa
gccctgcaggatgtgccgaaggagctcagtagccccccgcctcggcccctcgctgtgcag
aggattgcctcgctgctcaccctcctcacccagctgaccttggcagccggccacatcgcc
cctgaacacaatagtcactctgctgaggccagtctgttggccggctcttcctcagtcact
tggacacaggtgtctgggctccagcctctcgtggagccatgtctcagacagaccttgaag
ttgctgcccagacctgagatgtggagtgccctgggcccggtgcccactgcctgcctgctc
ttcctggacgcctactaccaggcctggagccagcagccaggcctgtgcccagaggattgg
ctgcaggacatggagcgcctgtcagaggggctgctgctgcccctgctgaaacacccttct
ctgggcagcctgtgggattccctggggtgctgctcccctctgtgcaacccacagtcctgt
gctgtggcccccgaaactatctccagcctcgcgtcactgggctgtgcggggggccacccc
cctctcagtctggctggctcagcttcccccttcccgttcctcacggccctcctgtctctt
cttaacaccctgggccggatccacaaaggactgtgtggccagctggccaccgtactggct
gccccgggactccaggactatttcctgcgatgtgtggctcctgtggccgctctgcacctc
acccccttctctgcgtgggccctgcgccacgagtaccacctgcagtacctggcactcacc
ctggcccagagagcggcaacactgcagccaccaatgtcaggcaccgacgcggccctctgt
catggcatggccttggccctgctgggccggctgctgcctgggagtgagcacctcgcccat
gagctgatgctgagctgtgtgttccggctggagttcctcccagaaagagcctcagggggt
ccagaggcagctgacttctctgaccggctctccttaggaagcggtggagaccttggatgt
gggcgaggggctctcctagctcaggcctgccaggacctccccagcatccgcagctgctac
ctgacccactgctcactggcccgggctagtctgctcgcctcccaagccttgtacagaggg
gagctccagcgagtcccagccttgctgctccctgtgcctaaggagccgctgctgcccact
gactggccttttctgccattgattcaactctaccaccgggcctcagacaccccctcgggg
ctccctcctgctgacactgtgggcacagccctgcgggccctgcagtgggtgcttgtcctg
gagagctggcgcccccgggcgctctgggctgtgtctcctgctgcccgcctggcacggctc
atgtgtgtgttcctggtggacagtgagttgttccgggagaccccaatacaacgcctggtg
gcagcccttctggcccggctctgccagcctgaagtcctatcaaatctcaacctggattgc
ccacttcctggactgacatcttttccggacctctatgccaacttcctggagcattttgag
gctgtctcttttggggaccacctctttggggctctgattctcctgccgctacagcgtcga
ttcagcgtcaccttgcgcctcgccctctttggggagcacgtgggtgccttgcgagctctg
ggcctgccactgacccagctgcctgtgtccctggagtgctacacggcgcctcctgaagac
aacttggccctccttcagctctacttccgggctctggttactggtgcactccgtccacgc
tggtgccctgtgctttatgctgtggctgtggctcatgtcaacagcttcatcttctcccag
gacccaaataactcagacgagatcaaggctgcctgtagaagcatgctgcagaagacttgg
ctgctgacagatgagggccttcggcagcaccttctccactataagcttcccaattctgcc
cttcctgagggttttgagctgtatccccagttgcctcctctgcgtcagcagtaccttcag
aaactaaggatctcaggggtgctcccaaatggggtatcagatacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (50)   

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