KEGG   Bos taurus (cow): 534604
Entry
534604            CDS       T01008                                 
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
  KO
K08285  midline 1 [EC:2.3.2.27]
Organism
bta  Bos taurus (cow)
Pathway
bta04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    534604 (MID1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bta04121]
    534604 (MID1)
Enzymes [BR:bta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     534604 (MID1)
Ubiquitin system [BR:bta04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    534604 (MID1)
SSDB
Motif
Pfam: COS SPRY zf-B_box fn3 zf-RING_UBOX PRY zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 Pur_ac_phosph_N zf-RING_2 zf-RING_5 zf-C3HC4_2 U-box
Other DBs
NCBI-GeneID: 534604
NCBI-ProteinID: NP_001179751
BGD-bta: BT21365
Ensembl: ENSBTAG00000010152
VGNC: 31464
UniProt: E1BAD8
Position
X:132157308..132306723
AA seq 667 aa
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANSMTSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLMEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCHNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDITFSQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggaaacactggagtcggagctgacctgccctatttgtctggagctcttcgaggaccct
ctcctgctcccctgcgcacacagcctctgcttcaactgtgcccaccgcatcctggtgtca
cactgcgccaccaacgagtccgtggagtccatcaccgccttccagtgccccacctgccga
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcaccctccag
aacatcatcgacaggttccagaaagcttcagtgagtgggcccaattcccccagcgagacc
cgccgggagcgggcatttgacgccaacagcatgacctcggccgagaaagtcctctgccag
ttctgtgaccaggatcctgcccaggacgccgtgaagacctgtgtcacttgcgaagtgtcc
tactgtgacgagtgcctaaaagccactcacccgaacaagaagcccttcacaggccaccgt
ctcattgagcccatcccggactcgcacatccgggggctgatgtgcctggaacacgaggat
gagaaggtgaatatgtactgcgtgaccgatgaccagttaatctgtgccttgtgtaagctg
gtcgggcggcaccgagatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttggagagtaacctcaccaaccttattaagaggaacacggaactggagacgctt
ttggctaaactcattcaaacatgtcaacatgttgaggtcaatgcatcacgtcaagaagcc
aaattgatggaggaatgtgatcttcttattgagatcattcagcaaagacgacaaatcatt
ggaaccaagatcaaagaaggaaaggtgatgaggcttcgcaaactggctcagcagattgca
aactgcaaacagtgcatcgagcggtcggcatcactcatctcccaagcagaacactctctg
aaggagaatgatcacgcgcgtttcctacagaccgctaagaatatcactgagagagtctcc
atggcaacagcatcatcccaggtcctcattcctgaaatcaacctcaatgacacatttgac
accttcgccttagatttttcccgagagaagaaattgctagaatgtctggattaccttaca
gctcccaaccctcccacaattagagaagagctctgcacggcttcctatgacaccataacc
gttcactggacctctgatgacgaattcagtgtggtttcctatgagctccagtacaccatc
ttcactggacaagccaatgttgtgagtctgtgcaactcggccgatagctggatgatcgtg
cccaacatcaagcagaaccactacacggtccatgggctgcagagcggcaccaagtacatc
ttcattgtcaaggccatcaaccaggcaggcagccgcagcagtgagcctgggaagttgaag
acgaacagccaaccatttaaactggaccccaaatctgcacatcgaaagctaaaggtgtcc
catgataacttgacagtagaacgtgatgagtcatcatccaaaaagagccacacgcctgag
cgcttcaccagccaaggcagctatggcgtagctggaaacgtgttcattgatagtggccgc
cattactgggaagtggtcataagcggaagcacatggtatgccattggccttgcatacaag
tcagccccaaagcacgagtggattggcaagaactctgcttcctgggcgctgtgccgctgc
cacaatacctgggtggtaagacacaacagcaaggagatccccatcgagccagccccccac
ctccggcgtgtcggcattctgctagactacgataatggctccatcgctttctatgatgcc
ttgaactccatccacctctacactttcgacatcacattctcgcagcctgtgtgccccacc
ttcactgtgtggaacaaatgtctgaccatcataacaggccttcccatccctgaccatcta
gactgtacagagcagctgccctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (38)   

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