KEGG   Bos taurus (cow): 534692
Entry
534692            CDS       T01008                                 
Symbol
SSX2IP
Name
(RefSeq) afadin- and alpha-actinin-binding protein
  KO
K06085  synovial sarcoma, X breakpoint 2 interacting protein
Organism
bta  Bos taurus (cow)
Pathway
bta04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:bta00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    534692 (SSX2IP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bta03036]
    534692 (SSX2IP)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Centriolar satellite
     534692 (SSX2IP)
SSDB
Motif
Pfam: ADIP
Other DBs
NCBI-GeneID: 534692
NCBI-ProteinID: NP_001069504
BGD-bta: BT20993
Ensembl: ENSBTAG00000018942
VGNC: 35329
UniProt: Q08DH0
Position
3:59398080..59457464
AA seq 614 aa
MGDWMTVTDPGLSSESKTISQYTSETKMSPSSLYSQQVLCSSIPLSKNVHSYFSAFCTEE
NIEQSISYLDQELTTFGFPSLYEESKGKETKRGLNIVAVLNCMNELLVLQRKNLLAQENV
ETQNLKLGSDMDHLQNCYAKLKEQLETSRREMIGLQERDRQLQCKNRNLHQLLKNEKDEV
QKLQNIIASRATQYNHDMKRKEREYNKLKERLHQLVMNKKDKKIAMEVLNYVGRADGKRG
SWRTGKTEARNEDEMYKILLNDYEYRQKQILMENAELKKVLQQMKKEMISLLSPQKQKPR
ERADDSTGTVISDIEEDAGELSRESIWDLSCETVREQLTNSIRKQWRILKSHVEKLDNQV
SKVHLEGFNDEDVISRQDHEQETEKLELEIQQCKEMIKTQQQLLQQQLATACDDDTTSLL
RDCYLLEEKERLKEEWSLFKEQKKNFEKERRSFTEAAIRLGLERKAFEEERASWLKQQFL
NMTTFDHQNSENVKLFSAFSGSSDRDTPTLHSRSRQKKPHGVPSGSPVCTSKLTKSLPAS
PSTSDFCQTRSCASEHSSINVLNITTEETKPNQVGRECTNQKWSMSSRPGSQEGCYSGCS
LAYTNSHVEKDDLP
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgggagattggatgactgttacagatccaggtctgtcttcagaaagcaaaactatctct
caatatacctcagaaacaaagatgtctccatcaagtttatactcacagcaagtgctatgt
tcttcaatacctttatcaaaaaacgtgcacagttattttagtgccttctgcacagaagag
aatattgagcaaagtatctcatatcttgatcaggaattgactactttcggttttccttca
ttatatgaagaatccaaaggtaaagagacaaagagaggattaaatatagttgctgtttta
aattgcatgaatgagctacttgtacttcagcggaagaaccttctagctcaggaaaatgtg
gaaacacagaatttgaaactgggaagcgatatggaccatctacagaactgctatgcaaaa
cttaaggaacagctggaaacctccaggagagaaatgattggtcttcaggaaagagacaga
caattacaatgcaagaataggaatttgcatcagctactgaaaaatgagaaagatgaggtg
cagaaattacaaaatatcattgcaagtcgagctactcaatataatcatgatatgaagaga
aaagagcgtgaatataataaactaaaggaacgtttacatcaacttgttatgaacaagaag
gataaaaaaattgctatggaagttttaaattacgtggggagagctgatgggaaaagaggc
tcctggaggacgggtaaaaccgaagccaggaatgaagatgaaatgtataaaattctcttg
aatgattatgaatatcgtcagaaacaaatcctaatggaaaatgctgaacttaagaaggtt
cttcagcaaatgaaaaaggaaatgatttctcttctttctccccaaaagcagaaacctaga
gaaagagcagatgatagtacaggaactgttatctctgatattgaagaggatgctggggaa
ctgagtagagagagtatatgggacctttcctgtgagactgtgagagagcagcttaccaat
agcatcagaaaacagtggagaattttgaaaagtcacgtagaaaaacttgataaccaagtt
tcaaaggtacacttagaaggttttaacgatgaagatgtaatctcacgacaagaccatgaa
caagaaactgaaaaactcgaattagaaattcagcagtgtaaagagatgattaaaactcag
cagcaacttttacagcagcagctcgctactgcatgtgatgatgacaccacttcactgcta
cgagactgttacttgctggaagaaaaggaacgcctcaaagaagaatggtccctatttaaa
gagcagaaaaagaatttcgagaaggaaagacgaagctttacagaagcagctattcgccta
ggattggagagaaaggcatttgaagaagaaagagccagttggttaaagcaacagttttta
aatatgactacctttgaccaccagaactcagaaaatgtgaaacttttcagtgccttctca
ggaagttctgatcgggatacccctacattacactcgaggtcacgccaaaagaagcctcac
ggtgtgcctagcgggtctccagtttgcacgtctaaactgactaagtctcttcctgcttct
ccttctacttcagacttttgccagacacgttcttgtgcatctgaacatagttcaatcaac
gttctgaatatcaccactgaagaaactaagccaaatcaggttggaagagaatgtacaaat
cagaagtggagcatgtcgtcaaggcctgggtcacaggaaggttgctacagtggatgctcc
ttggcctacacaaattctcatgtagagaaggatgacttaccttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (14)   
   UniProt (1)   
   RefSeq(pep) (13)   
DNA sequence (15)   
   RefSeq(nuc) (13)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (53)   

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