KEGG   Bos taurus (cow): 535571
Entry
535571            CDS       T01008                                 
Symbol
CAPRIN1
Name
(RefSeq) caprin-1
  KO
K18743  caprin-1
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    535571 (CAPRIN1)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     535571 (CAPRIN1)
SSDB
Motif
Pfam: Caprin-1_C Caprin-1_dimer
Other DBs
NCBI-GeneID: 535571
NCBI-ProteinID: NP_001069530
BGD-bta: BT16221
Ensembl: ENSBTAG00000016744
VGNC: 26751
UniProt: Q1LZB6
Position
15:64661035..64697665
AA seq 708 aa
MPSATSHSGSGSKSSGPPPPSGSSGNEAGAGAAAPASQHPMTGTGAVQTEAMKQILGVID
KKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQD
IQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEE
LSLLDEFYKLADPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKALKEIVERVFQ
SNYFDSTHNHQNGLCEEEEAASAPTVEDQAAEAEPEPVEEYTEQNEVESTEYVNRQFMAE
TQFSSGEKEQVDDWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDL
MAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPAQNMDIPQLVCPPVHSESRLAQPNQ
VSVQPEATQVPLVSSTSEGYTASQPLYQPSHATDQRPQKEPIDQIQATISLNTDQTTASS
SLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQ
ASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSQDQPHQVTGNHQQPPQQNTGFPRSNQ
PYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSTNTPNSGYTQSQFSAPRD
YSGYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNTQQVN
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgccttcggccaccagccacagcggaagcggcagcaagtcgtccggaccgccaccgccg
tcgggttcctccgggaatgaggcgggggccggggccgccgcgccggcttcccaacacccc
atgaccggcaccggggctgtccagaccgaggccatgaagcagattctcggggtgatcgac
aagaaacttcggaacctggagaagaaaaagggcaagcttgatgattatcaggaacgaatg
aacaaaggggaaaggcttaatcaagatcagctggatgccgtgtctaagtaccaggaagtc
acaaataacttggagtttgcaaaagaattacagaggagtttcatggcattaagccaagat
attcagaaaacaataaagaagacagcacgtcgggagcagcttatgagagaggaagctgaa
cagaaacgtttaaaaacagtacttgagctgcagtatgttttggacaaactaggagatgat
gaagtgagaactgacctgaagcaaggtttgaatggagtgccaatattgtctgaagaggag
ttgtcgttgttagatgagttctacaaattagcagaccctgaacgagacatgagcttgagg
ttgaatgagcagtatgaacatgcctccattcacctgtgggacttgctggaaggaaaggaa
aaacctgtatgtggaacaacttataaagctctaaaggaaattgttgagcgtgttttccag
tcaaactactttgacagcacccacaaccaccagaatggtctgtgtgaggaagaggaggca
gcctcagcacctacagttgaagaccaggcagctgaagctgaacctgagccagtggaagaa
tatactgaacaaaatgaggttgaatcaacagagtatgtaaatagacaatttatggcagaa
acacagttcagcagtggtgaaaaggagcaggtagatgattggacagttgaaacagttgag
gtggtaaattcactccagcagcaacctcaggctgcatctccttcagtaccagaaccccac
tctttgaccccagtggctcaagccgatcccctcgtgagaagacagcgagtacaggacctt
atggcacaaatgcaggggccctataatttcatacaggattcaatgttggattttgaaaac
cagacacttgatcctgccattgtatctgcacagccgatgaatccagcacagaacatggac
ataccccagctggtttgccctccagttcattctgaatctagacttgctcaacctaatcaa
gtttctgtacagccagaagctacacaggttcctttggtttcatccacaagtgagggatat
acagcatctcaacccttgtaccaaccttctcatgctactgaccaacgaccacaaaaggaa
ccgattgatcagattcaggcgacgatctctttaaatacagaccagactacagcatcatca
tcccttcctgctgcttctcagcctcaagtgttccaggctgggacaagcaaacctttacat
agcagtggaatcaatgtaaatgcagctccattccaatccatgcaaacggtattcaatatg
aatgccccagttcctcctgttaatgaaccagaaactttaaaacagcaaaatcagtaccag
gccagttacaaccagagcttttccagtcagcctcaccaagtagaacaaacagagcttcag
caagaacagcttcaaacagtggttggcacttatcatggttctcaggaccagccccatcaa
gtgactggtaaccaccagcagcctcctcagcagaacactggatttccacgtagcaatcag
ccctattacaacagtcgtggtgtgtctcgtggaggttcccgtggtgctagaggcttgatg
aatggatacagaggacctgctaatggattcagaggaggatatgatggttaccgcccttca
ttctctactaacactccaaacagtggttatacacaatctcaattcagtgctccccgggac
tactctggctatcagcgggatggatatcagcagaatttcaagcgaggctctgggcagagt
ggaccacggggagccccacgaggtcgtggagggcccccaagacccaacagagggatgccg
caaatgaacactcagcaagtgaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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