KEGG   Bos taurus (cow): 617525
Entry
617525            CDS       T01008                                 
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
  KO
K16682  LIM domain-containing protein
Organism
bta  Bos taurus (cow)
Pathway
bta04390  Hippo signaling pathway
bta04392  Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    617525 (LIMD1)
   04392 Hippo signaling pathway - multiple species
    617525 (LIMD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    617525 (LIMD1)
   03036 Chromosome and associated proteins [BR:bta03036]
    617525 (LIMD1)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     617525 (LIMD1)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Sister chromatid separation proteins
   Aurora kinases
    Regulators of Aurora kinases
     617525 (LIMD1)
SSDB
Motif
Pfam: LIM DUF35_N
Other DBs
NCBI-GeneID: 617525
NCBI-ProteinID: NP_001180092
BGD-bta: BT11038
Ensembl: ENSBTAG00000026097
VGNC: 30888
UniProt: G5E5X0
Position
22:complement(53629447..53708510)
AA seq 674 aa
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGAGNNPEFEETRRVFATKMAKIHLQQQ
QQQQLLQEETLPRASRGPINGGARLGPPAHREAGGGSKLAADGAAKPPLAASTVAPGTTI
TVAPGQPSYPPQEQRAKLYVRGSRQGSQDCGSKESMVNSEMSAFHRPGPCEDPSCLTHGD
YYDNLSLAGPKWADDPGVSPGIRLGVGSGWSGTPGSDPLLSKPSRDPHLYHQQLSAGSGR
SLQSGQDGGPGGGNSEKPAGVWTTASSQRVSPGLPSAGPENGALPRSAQPRTPSFSAPLA
LNRPSQGSLPRTNSGVGSEVSGTMPKPTVDPQPWFQDGPKSYLSSSAPSSSPASMDHMQA
GALPGLGPKPGSTDPGIGPKLSPNSLVHPVMSTLPELSCKEGASSWASDGSLGPVLPETP
SSPRVRLPCQTLIPGPELGPTAAELKLEALTQRLEREMDAHPKADYFGACVKCSKGVFGA
GQACQAMGNLYHDACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGH
LIMDMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGL
PILPPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRL
EKGPSPAALRQHHF
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggataagtacgacgacttgggcctggaggccagtaagttcattgaggacctgaacatg
tatgaggcctccaaagatgggctcttccgagtggacaagggtgcaggcaacaacccggag
tttgaggaaacacgcagggtgtttgctaccaagatggccaaaatccacctgcagcagcag
cagcagcagcagctcctacaggaggagaccctgcccagggcgagccggggtcccattaac
ggtggggcacgcctgggcccaccggcccacagggaagctggtgggggcagcaagctggcc
gcggacggtgctgccaagccccctctcgctgcctcaaccgtggcccctgggacgaccatc
accgtggcgcctgggcagccctcgtacccaccccaggagcagagggccaagctgtacgtc
cggggttcgaggcaaggcagccaagactgtgggtccaaggagagcatggtgaattctgag
atgtctgctttccatcggccgggcccctgtgaggatccctcctgcctcacccacggagac
tattacgacaacctgtccttggcaggccccaagtgggccgacgacccgggagtgtcccct
ggcatcaggttgggtgtaggaagtgggtggtctgggaccccagggagcgacccactgcta
tctaagccctccagggatcctcacctgtaccaccagcagctctccgcaggctctggcagg
tctttgcagagtggccaggatggtgggcctggaggaggcaacagcgagaagccagcgggg
gtctggaccaccgcctcttcccagcgagtgagccctggcctcccttccgctggcccagag
aatggggccctcccgaggtctgctcagcccaggaccccttctttctcagcgcctctggcc
ctgaaccggcccagtcaaggctctcttcccagaacaaactcgggggtagggagtgaggtt
tcaggcacgatgcccaaacccactgtggaccctcaaccctggttccaggatgggcccaaa
tcttacctttctagctctgccccttcatcctcgccagccagcatggaccatatgcaggcg
ggtgccctccctgggctgggtcccaagcctggctctacagatcctggcattggtcccaag
ctcagccccaacagccttgtccatccagtgatgtccaccctgcctgagttatcttgtaaa
gaaggtgcctccagctgggcctctgatggcagcctggggcctgtgctcccagagacgccg
agttcccccagagtgaggttaccctgccagacgctcatcccgggccctgagcttggaccc
acggccgccgaattgaagttagaagccctcacccagcgtctggagcgggagatggatgct
cacccgaaggccgattactttggagcctgtgtgaaatgcagcaagggggtgtttggggct
ggccaggcctgccaggccatggggaacctctaccacgatgcgtgcttcacctgtgcggcc
tgcagccggaagctgagaggaaaagccttttatttcgtcaacggcaaagtgttctgcgag
gaagacttcctgtactctggtttccagcagtccgctgacaggtgttttctctgtggacat
ctgatcatggacatgatcctgcaggccctggggaagtcgtaccaccccggctgcttccgc
tgcgtcatctgtaatgagtgtttggacggggtgcccttcaccgtggactcggagaacaag
atctactgtgtccgggattaccacaaggtgttggcccccaagtgtgcagcctgcggcctt
cccatccttcctcctgagggttcagatgagaccatccgagtcgtgtccatggacagagac
tatcatgtggagtgttaccactgtgaggactgcggcctggagctcaatgatgaagacggc
caccgatgctaccccctggaggaccacctgttctgccactcctgccacgtcaagaggctg
gagaagggcccctcgcccgcagcccttcgccaacaccacttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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