KEGG   Bos taurus (cow): 618198
Entry
618198            CDS       T01008                                 
Symbol
SDC3
Name
(RefSeq) syndecan-3 precursor
  KO
K16337  syndecan 3
Organism
bta  Bos taurus (cow)
Pathway
bta04514  Cell adhesion molecules
bta04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    618198 (SDC3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    618198 (SDC3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:bta00535]
    618198 (SDC3)
Proteoglycans [BR:bta00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   618198 (SDC3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 618198
NCBI-ProteinID: NP_001193460
BGD-bta: BT14306
Ensembl: ENSBTAG00000026676
VGNC: 34380
Position
2:122667127..122702779
AA seq 442 aa
MKPGPPHRAGAAHGAGAGAGAAAGPGARGLLLPPLLLLLLAGRAAGAQRWRSENFERPVD
LEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIETAMRFSPDVALAMSTTPAVLPTMDIQ
PVGTPFEELPSERPTPEPATSPPLVTEVPEEPSQRATTVSTPTATTTATTTGPPTVATVP
ATVATAVPSIPAAPPSAATTSVVRTTGVRRLLPLPLTTAATARATTPAVPSPPTTVAVLD
TEAPTPRLVSTATSRPRALPRPATTQKPDIPEKSTLPLGTTAPGPTEVAQTPTPESFLTT
IRDEPEMPVSGGPSGDFELSEEETTQPDTANEVVAVGGAEAKPSPPPGTLPKGAHPGPGL
LDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaagccggggccgccgcaccgcgccggggccgcccacggggctggcgccggggccggg
gccgcggctgggcccggggcccgcgggctgctcctgcctccgctgctgctgctgctgctg
gcggggcgcgccgcgggggcccagcgctggcgcagtgagaacttcgagaggcccgtggac
ctcgagggctctggggatgacgactccttccccgatgacgagctggacgacctctactct
gggtcgggctccggctactttgagcaggaatcgggcattgagacagccatgcggttcagc
ccagatgtcgccctggcaatgtccaccacccccgcagtgctgcccaccatggacatccag
cctgtgggcaccccgtttgaagagctcccctctgagcgccccaccccggagccagccacc
agccccccactggtgacagaggtgccagaagagcccagccagagagccaccaccgtctcc
acccctacggctaccaccactgccaccaccacagggcccccgacggtggccacagtgccc
gccacagtggccaccgccgtgcccagcatccctgcggcgcccccgtctgcggccaccacc
tctgtcgtaaggaccaccggcgtacggaggcttctgcctctgccactgaccacagcggcc
acagcccgggccaccaccccagcggtgccctcacctcccaccacggtggctgtcttggac
acagaggccccaacgcccaggctggtcagcacagctacctccaggccaagggcccttccc
aggccggctaccacccagaagcctgatatccctgagaagagcaccctgcccctggggacc
actgcccctggacccacggaggtggctcagaccccaactccagagtccttcctgaccacc
atccgggacgagccagagatgccagtgagcgggggacccagtggggactttgagctgtca
gaggaagagaccacacagccagacacagccaatgaagtggtggctgtgggtggggccgag
gccaagccatcacctccgccagggacgctgcccaagggtgcccacccaggccctggcctc
ctggacaatgccatcgactcaggcagctcggcggctcagctgccccagaagagcatcctg
gagcggaaggaggtgctcgtagctgtgatcgtgggcggggttgtaggcgccctctttgct
gccttcctggtcaccctgctcatctaccgcatgaagaagaaggatgagggcagctacacg
ctggaggagcccaagcaggcgagcgtcacataccagaagcctgacaagcaagaggagttc
tacgcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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