KEGG   Bemisia tabaci (sweet potato whitefly): 109032797
Entry
109032797         CDS       T06019                                 
Name
(RefSeq) general transcription factor IIH subunit 4
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
btab  Bemisia tabaci (sweet potato whitefly)
Pathway
btab03022  Basal transcription factors
btab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:btab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109032797
  09124 Replication and repair
   03420 Nucleotide excision repair
    109032797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btab03021]
    109032797
   03400 DNA repair and recombination proteins [BR:btab03400]
    109032797
Transcription machinery [BR:btab03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     109032797
DNA repair and recombination proteins [BR:btab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     109032797
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 109032797
NCBI-ProteinID: XP_018900640
UniProt: A0A9P0F4G5
Position
Unknown
AA seq 470 aa
MSDKSKNLPSKQSLKSRTLQCKNLHEYLKTLNPSTLDNLYNHPTTCLAVFRELPHEAKHF
VIRLLFVEQPVPQAVISSWIPQAFVKELTAATNTLSELRVWHGAPIPGGLPGWILNPSFR
KNLQSALLGGGKPWTLSAQMEEDTKPRDIKFLDDYAMERWECVLHYMVGSHQQEGISADA
VRILLHAGLMKGDEEDGSPIITKEGFQFLLLDTSAQVWYFILQYLDTVNERGLSLVECLT
FLFQLSFSTLGKDYSTEGLNEKLLIFLQHLREFGLVYQRKRKAGRFYPTRLALNLATSQV
QLQNDATQAVEGYLVVETNYRVYAYTDSNLKVALLGLFAEMMYRFPNLSVGLLTRDSVRA
ALRSGITAEQIVGFLRLHAHPKLLANNPVLPPTIVDQIKLWENERDRFTFTDGVLYSQFL
SQSDFITLRDYAQELGVLTWQNEKKRTMVVTKEGHDEVKKFWKRLSKNSS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtccgacaagagtaaaaacctacccagcaaacagagtttgaaaagtcgaactctccag
tgcaaaaacctgcatgagtatttaaaaactttaaatcctagcactttggataatctatac
aatcacccaacaacttgcctagcggttttcagggaattacctcatgaagctaagcatttc
gtcattcgtcttctgtttgtggaacaaccggttccccaagcagtgatttcctcttggatt
ccccaagccttcgtcaaagaattgaccgcagccacaaataccctcagtgagctgcgggtt
tggcatggagcacctattccaggggggttacctggctggattctcaatccgtctttcagg
aaaaatttacaaagcgccttattaggaggagggaaaccatggactctgtcggctcagatg
gaagaagacacgaaaccaagagatattaagttcctagatgattatgcaatggagcggtgg
gagtgtgtcttacattacatggttggctctcatcaacaagagggtatctctgcagatgct
gtgcgtattcttctccatgctggtttgatgaaaggggatgaggaggatgggagtcctatc
atcaccaaagaaggtttccagtttttgctcctagatacttcggctcaagtgtggtacttt
attctgcaatatttagacactgtcaatgaaaggggcttaagcctagttgaatgcttaaca
tttctgtttcaacttagtttttccactttaggaaaggactatagcactgaaggtttaaat
gaaaaacttctcatatttttacaacatttaagagagtttggacttgtctatcaaagaaag
cggaaagcaggcaggttttatcccactcgattagctctgaatcttgccacctctcaagtg
cagctacaaaatgatgcaacccaagcagtagaaggatatcttgttgtagaaaccaactat
cgagtctatgcttacacagattcaaacctaaaagtcgctttgttgggtctttttgcagaa
atgatgtacaggtttccgaacttgagtgtaggattacttaccagagactcagttcgagca
gcattacgcagtggcatcactgctgaacaaatcgttggatttctgcggttgcatgctcat
cctaaactgcttgccaacaatccagttcttcctccaacaattgttgatcaaatcaaactg
tgggaaaatgagcgagatcgctttacattcacagacggtgttctttactcacaattcctc
tcgcagtcagactttatcactctaagagattatgcccaagagcttggtgtcttaacatgg
cagaacgaaaaaaagaggacaatggttgtcacaaaagaaggtcatgatgaggtgaaaaag
ttttggaaaagactctcaaaaaacagtagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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