KEGG   Bacillus thuringiensis serovar chinensis CT-43: CT43_CH3870
Entry
CT43_CH3870       CDS       T01838                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
btc  Bacillus thuringiensis serovar chinensis CT-43
Pathway
btc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:btc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CT43_CH3870 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btc03021]
    CT43_CH3870 (rpoZ)
   03400 DNA repair and recombination proteins [BR:btc03400]
    CT43_CH3870 (rpoZ)
Enzymes [BR:btc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CT43_CH3870 (rpoZ)
Transcription machinery [BR:btc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CT43_CH3870 (rpoZ)
DNA repair and recombination proteins [BR:btc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CT43_CH3870 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AEA17535
Position
complement(3887872..3888084)
AA seq 70 aa
MLNPSIDSLLQKIDSKYTLVTVAAKRAREMQLANNCVVEQPVSHKCVGKALEEIDAEALS
YVPSEDKVAE
NT seq 213 nt   +upstreamnt  +downstreamnt
atgttaaatccatcaattgactcattactacaaaaaatcgattctaagtacacattagta
acagtggctgcaaaacgcgcacgtgaaatgcaacttgctaataactgtgttgtagagcaa
cctgtttctcataaatgtgtaggtaaagcattagaagaaatcgatgcagaagcattaagc
tacgtaccaagtgaagataaagtagctgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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