KEGG   Burkholderia thailandensis MSMB121: BTI_786
Entry
BTI_786           CDS       T02644                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
btd  Burkholderia thailandensis MSMB121
Pathway
btd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BTI_786 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btd03019]
    BTI_786 (pcnB)
Enzymes [BR:btd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     BTI_786 (pcnB)
Messenger RNA biogenesis [BR:btd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     BTI_786 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: AGK48904
Position
1:complement(851615..853168)
AA seq 517 aa
MIKKLIRKLLGQDARTTQDAPQDPAAPLEAEPAAPPAPSRAKSARGAAKKARNGEPAIVH
ANVHGIDPALISKNAIRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDATPTEVQ
RLFRRARLIGRRFQIVHVQFGQELIEVSTFRALVDAPQEPPADAAPAKRLKRDELDRRTH
AVDASGRVLRDNVWGEQHEDAARRDFTINAMYYDPASQTVLDYHDGMADMRARLLRMIGD
PATRYREDPVRMLRVVRFAAKLGFDIEEKTREPIKELADLINNVPAARLFDEMLKLLLSG
HALACLKQLRKQGLHHGLLPLLDVVLEQPQGEKFVTLALNNTDARVRAGKPVSPGFLFAT
LLWHDMRQRFEQYVANGEYPVPAINRAMDDVIDMQTEKLAIHKRYSADMREIWGLQLRLE
KRSGRSALRLLEHQRFRAGYDFLLLRCESGELDPAAGQWWTDFIDGDAAAREALLTQGGS
RDKSPRKRRRRGGRSRRTADSAESTEGAAHGESDAND
NT seq 1554 nt   +upstreamnt  +downstreamnt
gtgattaaaaaactcatccgcaagctgctcgggcaggacgcccgtacgacgcaagacgcg
ccgcaagacccggccgccccgctcgaggccgagcccgccgcgccccccgcgccgagccgc
gcgaaatccgcgcgcggcgccgcgaagaaggcccgcaacggcgagccggccatcgtgcac
gccaacgtgcacgggatcgatcccgcactcatctcgaaaaacgcgatccgcgtcaccgat
acgctgcagcaagccggctttcgtgcgttcatcgtcggcggcgcggtgcgcgacctgttg
ctcggcatcgcgccgaaggacttcgacgtcgcgaccgacgcgacgccgaccgaggtccag
cgcctgttccgccgcgcgcggctgatcggccggcgcttccagatcgtccacgtgcagttc
ggccaggagctgatcgaggtgtcgacgttccgcgcgctcgtcgacgcgccgcaggagccg
cccgccgacgccgcgcccgcgaagcgcctgaagcgcgacgagctcgaccgccgcacgcat
gcggtcgacgcgagcgggcgcgtgctgcgcgacaacgtgtggggcgagcagcacgaggac
gcggcgcgccgcgacttcacgatcaacgcgatgtactacgacccggcgtcgcagaccgtg
ctcgattaccacgacgggatggccgacatgcgcgcgcgcctgttgcggatgatcggcgat
ccggcgacgcgctaccgcgaggacccggtgcggatgctgcgcgtggtgcgcttcgcggcg
aagctcggcttcgacatcgaggagaagacgcgcgagccgatcaaggagctcgccgatctg
atcaacaacgtgccggccgcgcgcctgttcgacgagatgctcaagctcctgctgtcgggc
cacgcgctcgcgtgcctgaagcagctacgcaagcaggggctgcaccacgggctgctgccg
ctcctcgacgtcgtgctcgaacagccgcagggcgagaagttcgtcacgctcgcgctgaac
aacaccgacgcgcgcgtgcgcgcgggcaagccggtgtcgcccggcttcctgttcgcgacg
ctcctctggcacgacatgcgccagcgcttcgagcagtacgtcgcgaacggcgagtacccg
gtccccgcgatcaatcgcgcgatggacgacgtgatcgacatgcagaccgagaagctcgcg
atccacaagcgctattcggccgacatgcgcgagatctggggattgcagttgcgcctcgag
aaacgctccggccgcagcgcgctgcgcctgctggaacaccaaagattcagagcggggtat
gatttcctcctgttacgctgcgaatccggcgagctcgatccggccgccggacaatggtgg
acggatttcatcgacggcgacgccgcggcgcgcgaggccctcctcacgcagggcggcagt
cgggacaagtcgccccgcaagcggcgccgccgcggcggacgcagccgccggacggccgac
agcgccgagagcacggaaggcgccgcgcacggcgagtccgacgcgaacgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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