KEGG   Burkholderia territorii: WS51_15805
Entry
WS51_15805        CDS       T04843                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
btei  Burkholderia territorii
Pathway
btei03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btei00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WS51_15805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btei03019]
    WS51_15805
   03009 Ribosome biogenesis [BR:btei03009]
    WS51_15805
Enzymes [BR:btei01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     WS51_15805
Messenger RNA biogenesis [BR:btei03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     WS51_15805
Ribosome biogenesis [BR:btei03009]
 Prokaryotic type
  rRNA processing factors
   WS51_15805
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AOI65100
Position
1:complement(1104719..1107865)
AA seq 1048 aa
MKRMLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVVTRIEPSLEACFVNY
GEDRHGFLPFKEVARQYFKEGIDMRSARIQDALREGQELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGDERQELRETMAQLQIPDGMSMIARTAGIGRSAEELQ
WDLNYLLQLWRAIEAASQSGNAGQPMLIYLESSLVIRAIRDYFQPDIGEILIDTTEIYDQ
ARAFMDIVMPDNVSKVKRYHDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALV
AIDVNSARATKGADIEETATRTNLEAADEVARQLRLRDLGGLIVIDFIDMESAKSQREVE
QRLKDALKHDRARVQMGKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRDTESSA
LQVLRIIQEEAMKENTAAIHCQVPVEVTAFLLNEKRQEINKIESRFKVGIVLIPNKHLDT
PHYKLERLRHDDARLDDPRASWKMAEEAARELESETGYSKRAADVKPKQEAAVKGITPER
PAPSPAPQRPVEPVAAPAPVAAASGGFIGWLKGLFGMSPAPAPAPVAPAPAKEQAARPAR
ERTEKTEQRGGDRNRNRRGGAQQAQGGRDQVAAGRGQSQRQEREGKEAREPREPREGREP
REGREPRESRESRESREGREGRGPREGREPREAREPREPRQNREPRERTEQPEAVEAAGS
GERQERGERRERGERRKPTQHAATLETVTRGENHPEAETAQAAAVALPGADAAADAEAGA
RDGEERRRRRRGRRGGRREREDEGAVVDHAEQGADGEAVVQAVTTEAPSAAEPVHTAAPV
AVAAVAAAGAAVAEAAVAEATAPVAAEPQPAPVRVEATPVAPLEPAVVAPAAESAPVVPA
VAQEAGPAPVAVSPTDAFEVPAAPAVVEAPQSAPVEQAAPAPVVAAEAAPSAVEPAHVEP
ARVETAPAEAVAAPAPAPVQPVASPASTSLDVVLQQAGLVWVNTDADKFRAAQEAASRLP
RAVRVPRERKPLPPVDTTPMQQVETSRH
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgaaacgcatgctgttcaatgcgacgcagcaggaggagctgcgcgtcgccatcgtcgat
gggcaaaagctcatcgacatcgacatcgaaacagccgggcgcgaacagcgcaaaggcaat
atctacaaaggtgtcgtgacccgcatcgagccgtcgctcgaagcgtgcttcgtcaactac
ggcgaagaccgccacggcttcctgccgttcaaggaagtcgcccgtcaatacttcaaggaa
ggcatcgacatgcgctccgcgcgcatccaggatgccctgcgcgaaggccaggagctgatc
gtccaggtcgagaaggaggagcgcggcaacaagggcgccgccctcacgaccttcatctcg
ctcgccggccgctacctcgtgctgatgccgaacaacccgcgcggcggcggcgtgtcgcgc
cggatcgaaggcgacgagcgtcaggaattgcgcgaaacgatggcgcagctgcagattccg
gacggcatgagcatgatcgcccgcaccgcgggcatcggccgcagcgccgaggaactgcag
tgggacctgaactacctgctgcagctgtggcgcgcgatcgaagcggcatcgcaaagcggc
aacgccggccagccgatgctgatctatctggaatcgagcctcgtgatccgcgcgatccgg
gactatttccagcccgatatcggcgaaatcctgatcgacacgaccgagatctacgatcag
gcccgtgcgttcatggacatcgtgatgccggacaacgtgtcgaaggtgaagcgctaccac
gacgacgtgccgctcttctcgcgcttccagatcgagcaccagatcgagaccgcatattcc
cgcacggtgccgctgccgtcgggcggcgcgatcgtgatcgaccacaccgaagcgctcgtc
gcgatcgacgtgaactcggcgcgtgcgaccaagggcgcggacatcgaggaaacggcgacc
cgcacgaacctcgaagcggcggacgaagtggcccgccagctgcgcctgcgcgacctcggc
ggcctgatcgtgatcgacttcatcgacatggagtcggcaaagagccagcgcgaagtcgag
caacgcctgaaggacgcgctcaagcacgaccgtgcgcgcgtgcagatgggcaagatctcc
cgcttcggcctgatggaactgtcgcgccagcgcctgcgcccggccctgtcggaaggcagc
cacgtgacgtgcccgcgctgtaacggcaccggccacatccgcgataccgaatcgtccgcg
ctgcaggtgctgcggatcattcaggaagaagcgatgaaggaaaacaccgcggcgatccac
tgccaggtgccggtcgaggtgaccgccttcctgctcaacgaaaagcgtcaggaaatcaac
aagatcgagtcgcgcttcaaggtcggcatcgtgctgatcccgaacaagcacctcgatacg
ccgcactacaagctcgagcgcctgcgccatgacgacgcacgcctcgacgatccgcgtgca
tcctggaagatggccgaggaagccgcccgcgaactggagtcggaaaccggctacagcaag
cgtgcggcggacgtgaagccgaagcaggaagccgcggtcaagggcatcacgcccgagcgt
ccggcaccgagcccggcaccgcagcgtccggtcgagccggttgcggcgccggcaccggtc
gccgcggcgagcggcggtttcatcggctggctgaagggtctgttcggcatgtcgccggct
ccggcgcccgcgccggtcgcaccggcaccggcgaaggaacaggccgcccgcccggcgcgc
gagcggaccgagaagaccgagcagcgcggcggcgatcgcaatcgcaaccgccgtggcggc
gcccagcaggctcagggcggccgcgaccaggtagcggccggccgtggccagtcgcaacgc
caggaacgcgaaggcaaggaagcgcgcgagccgcgtgaaccgcgcgagggtcgcgaaccg
cgtgaaggccgcgagccgcgcgaaagccgcgaaagccgcgaaagccgcgaaggtcgcgag
ggccgcggtccgcgcgaaggccgcgaaccgcgtgaagcccgcgagccgcgtgaaccgcgc
cagaaccgcgaaccgcgcgaacgcaccgagcagccggaagccgtcgaggcagccggcagc
ggcgagcgccaggaacgcggcgagcgtcgcgagcgcggcgagcgccgcaagccgacgcaa
cacgcggcaacgctcgaaaccgtcacccgtggcgagaaccatccggaggcggaaaccgcc
caggccgcagccgtcgccctgccgggcgccgatgcagcagccgacgcggaagccggcgca
cgtgacggcgaggaacgtcgtcgccgccgccgcggtcgccgtggcggccgccgcgagcgc
gaggacgaaggcgcagtggtcgaccacgccgagcaaggcgcggacggcgaagccgtcgtg
caggccgtgacgacggaagccccgagcgctgccgagccggttcatacggccgcaccggtc
gcggtggcagccgtcgccgctgccggcgccgccgttgccgaagcagccgtggctgaagca
accgcaccggtcgcggccgagccgcagccggcaccggttcgcgtcgaagcgacgccggtc
gcgccgctcgagcccgccgtcgtcgcaccggcagccgaatcggcaccggtcgtgccggct
gtcgctcaggaagccggcccggctcccgtcgcggtgtcgccgaccgatgcgttcgaagtg
ccggccgcgccggccgtcgtcgaagcgccgcagtccgcgcccgtcgagcaagccgccccg
gcaccggtcgtcgcagccgaagcggctccgtccgccgtcgaaccggctcacgtcgaaccg
gcgcgtgtcgaaactgcgccggccgaggccgttgccgcaccggcaccggcgcccgtgcaa
ccggtcgcgtcgcccgcttcgacgagcctcgatgtcgtgctgcaacaagccggcctcgtg
tgggtgaacaccgacgccgacaagttccgcgcggcccaggaagccgcgtcgcgcctgccg
cgcgcggtccgcgtcccgcgcgaacgcaagccgctgccgccggtcgacacgacaccgatg
cagcaggtcgaaacgtcgcggcattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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