KEGG   Bombus terrestris (buff-tailed bumblebee): 100648701
Entry
100648701         CDS       T04364                                 
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03022  Basal transcription factors
bter03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bter00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100648701
  09124 Replication and repair
   03420 Nucleotide excision repair
    100648701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bter03021]
    100648701
   03400 DNA repair and recombination proteins [BR:bter03400]
    100648701
Transcription machinery [BR:bter03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100648701
DNA repair and recombination proteins [BR:bter03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     100648701
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3 ACP_syn_III_C
Other DBs
NCBI-GeneID: 100648701
NCBI-ProteinID: XP_003393621
UniProt: A0A9B0BUQ2
Position
LG B02:complement(3168408..3170713)
AA seq 467 aa
MSNTISGKNLLRPAGLQCKNLQEYLKSRPPEVLNKLYHNPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLHFEEHQKVVLILNELNVWKEASIPGGLPGWILNTTFKKNL
KIVLLGGGKPWTMSNQLETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPVITQAGFQFLLLETASQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLSTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SRDPEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITAAQIVGYLQQHAHGKMIEAGPPVLPPTIVDQIKLWENERNRFIFNEGVLYSQFLSQT
DFEVLRDHALSTGVLIWQNERKRTIVVTKAGHDDVKKFWKRYSKGSS
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtcaaatacaataagtggaaaaaacttgttacgaccagctggattgcaatgtaaaaat
cttcaagaatatttaaaatcacgtccaccagaagtattaaacaaattatatcataatcct
ccaatttgcttggctgtgtttcgggaattgccggtaatagcaaaacattatgttatgcga
ttattatttgttgaacaacctgtacctcaagcggttattgcctcctggtgttctaaactt
cattttgaggaacatcaaaaagtagttttgatactaaatgaactaaatgtatggaaagaa
gcatcaataccaggtggactacctggatggattttaaatactacattcaagaaaaactta
aaaatcgttcttttgggaggtggaaaaccatggacaatgtcaaaccaattagaaactgat
agtaaacctagagatgttgcatttttagattcatatgcattagaaaggtgggaatgtgtt
ttacattacatggttggttcacaacagcaagaaggtatatctgctgatgctgttagaatt
cttttacatgctggcttgatgaagcgtgatgaagctgatggaagcccagttattacacaa
gcaggttttcaatttttgttattggaaactgcatcgcaggtgtggtattttattttacaa
tacctagatacaatagaagcaagaggacttgacctagttgaatgtcttacttttttattt
caattaaatttctcgacacttggtaaagattacagtactgaaggaatgtccgaaggtctg
tcaacatttttacaacatttaagagaatttggtttggtttatcaaagaaaacgaaaagct
ggaagattttatcccacaagattagcattaaatattgcaactggacaaaataaaccattg
tctagagatccagagaaggagggttacattgttgttgaaacaaattacagagtatatgct
tatacaaactcgaatttacaagtagctttacttggactattttgtgagatgttatatagg
tttccaaacctggttgtgtcaatattaacaagagattctgtacgtcaagctctgaaaagt
ggaattactgctgcccaaattgtaggttatttgcagcaacatgctcatggtaaaatgata
gaagcaggtcctccagttttaccaccaactatagtagatcaaattaaattatgggaaaat
gaaagaaatagattcatatttaatgaaggagttttatatagtcaatttctttctcaaact
gattttgaagtccttagagatcatgctctttctactggagtactaatttggcaaaacgaa
aggaaacggactatagtagttacgaaagcaggtcatgacgatgtaaaaaaattttggaaa
cgatattccaaaggctccagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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