KEGG   Bacillus thuringiensis serovar finitimus YBT-020: YBT020_18260
Entry
YBT020_18260      CDS       T01839                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
btf  Bacillus thuringiensis serovar finitimus YBT-020
Brite
KEGG Orthology (KO) [BR:btf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:btf03032]
    YBT020_18260
   03036 Chromosome and associated proteins [BR:btf03036]
    YBT020_18260
   03400 DNA repair and recombination proteins [BR:btf03400]
    YBT020_18260
DNA replication proteins [BR:btf03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    YBT020_18260
Chromosome and associated proteins [BR:btf03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    YBT020_18260
DNA repair and recombination proteins [BR:btf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      YBT020_18260
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2530 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: ADY22880
Position
3573274..3573546
AA seq 90 aa
MNKTELIKNVAQNAEISQKEATVVVQTVVESITNTLAAGEKVQLIGFGTFEVRERAARTG
RNPQTGEEMQIAASKVPAFKAGKELKEAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattaattaaaaacgtagcacaaaatgctgagatttctcaaaaagaa
gctactgtagttgtacaaactgtagtagaatcaatcactaacactttagctgctggtgaa
aaagtacaacttatcggattcggtacattcgaagttcgcgaaagagctgctcgtacaggc
cgtaacccacaaactggtgaagaaatgcaaatcgcagcttctaaagtacctgctttcaaa
gctggtaaagaacttaaagaagctgtaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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