KEGG   Bacillus thuringiensis serovar kurstaki HD-1: BTK_28230
Entry
BTK_28230         CDS       T03473                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bthi  Bacillus thuringiensis serovar kurstaki HD-1
Pathway
bthi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bthi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BTK_28230 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bthi03021]
    BTK_28230 (rho)
   03019 Messenger RNA biogenesis [BR:bthi03019]
    BTK_28230 (rho)
Transcription machinery [BR:bthi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BTK_28230 (rho)
Messenger RNA biogenesis [BR:bthi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BTK_28230 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 ATPase_2 AAA Spore_III_AA NACHT AAA_22
Other DBs
NCBI-ProteinID: AIE36637
Position
complement(5436351..5437622)
AA seq 423 aa
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFSILKARAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDDPDSAKERVHFPALTPLYPDRQMKLETEPKKLPTRIMDLIAPVGFGQRGLIVAPPKA
GKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVESFLRKLRQTKTNEEFLQNIVADSKRYV
TTK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaatttgtcaattgcagcattagaaaacatgaaattaaaagagttatacgagcttgcg
aaagaatttaagatttcgtattatagcaaattaacgaaaaaagagttaattttttctatt
ttgaaagctcgagcagaaaaagaaggtttctttttcatggaaggcgtattagaaattatt
caatcagaaggatttggattcctacgtcctatcaactattctccaagctcagaagatatt
tatatctcagcttcgcaaattcgtcgtttcgatttacgtaatggagataaggtttctggt
aaagtacgacctccgaaagaaaatgaacgctattttgggttattacaagttgaagctgta
aacggagatgatccagattcagcaaaagagcgtgtgcatttccctgcattaacaccatta
tacccagatcgccaaatgaaattggaaacggaacctaaaaagttaccgacacgcatcatg
gatttaatcgcaccagttggatttggacaacgtggtttaattgttgcgcctccaaaggct
ggtaaaacaagtctattaaaagaaatcgcgcatagtgttacaacaaatcatccggaagca
gaattaattgtacttttaattgatgagcgtccagaggaagtaacagacattgaacgttct
gttaaaggagatgttgtaagttctacttttgatgaagtgccagaaaatcatattaaagta
gctgagcttgtgttagaacgtgcgatgcgtcttgtagagcacaagaaagatgttatcatt
ttaatggatagtattacccgtttagctcgagcttacaacctcgttattccaccaagtggt
agaacattatcaggtggtatcgatccagctgccttccatagaccgaagcgtttctttgga
gctgcgcgtaatattgaagaaggcggtagcttaacaattttagcgacagcccttgttgat
acaggatcacgtatggacgatgttatttacgaggaatttaaaggaactggaaatatggaa
cttcacttagatcgttcattagctgaacgtcgtatcttcccggcgatcgatattcgtcgt
tctggtacacgtaaagaagatctattaattccaaaagaacatttagacaagttatggggc
attcgtaaaacaatgcgtgatacaccagacttcgttgaaagtttcttacgtaagcttcgt
caaacgaagacaaatgaagagtttttacaaaacattgttgcagactcaaaaaggtatgta
acaactaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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