KEGG   Burkholderia thailandensis 2002721643: BG87_2750
Entry
BG87_2750         CDS       T03882                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bthl  Burkholderia thailandensis 2002721643
Pathway
bthl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bthl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BG87_2750 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bthl03400]
    BG87_2750 (recD)
Enzymes [BR:bthl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BG87_2750 (recD)
DNA repair and recombination proteins [BR:bthl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BG87_2750 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 AAA_11 Viral_helicase1 UvrD-helicase SH3_13 Helicase_RecD SLFN-g3_helicase DEAD MukB RecD_N CbiA UvrD_C AAA_22
Other DBs
NCBI-ProteinID: AJX99088
Position
I:complement(3122536..3125235)
AA seq 899 aa
MSVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAA
SRATAAGHVCVSLRALAQRYDEPFADVRDALAASGVTAFDSIARGAERPLVVDRDGRLYL
ARYFEYETRLASALVARARCGGAQAGDAGELMPEALGERLVRYFGPQKERGVDWQRVAAL
VALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPDLRIALAAPTGKAAQRMQEALHARAG
SLPAELAARLPRTSYTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLD
ALAPNARLVLLGDKDQLAAVEAGAVFAELSARPAFSSATCATIARALGVGEAEFVAALPQ
GGVLHAADAANAGASADARATSVDTGAAALAARATGAVAAAKVAPEAPAQRAPAPRAGRR
GGGRESKRGVDDAQGWLFAFEDEDAFSAEASGAGASGADESGAEALGVGTSGADAQDVGT
SSIDRRDDRASLDTPRRRRDALATHVRADSPGARDIENAAYVHAQADEAGVADLPWDASF
AEPAAWIEAGELEWLDNADFSISEGASANAGSDERRTATATDASAGGARAQAGRVPAAHA
GPDIEPQASAPANPAGAPSPDADAAAAPLTDCVIWLERNYRFGLDSPIGRLSLAIRRGAV
QDALDALSTADDAAARWCDDGGATLSAATVGQLARGFAGYAAALRDALATPDPDPLPLFD
VLNRFRVLCATRTGARGADEVNALVAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGL
FNGDIGIALPGARGALRVWFRGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALV
LPASFNRVLSRELVYTAITRARSRVRVIGARAVLALAIATRTARDSGLAARIADALRTR
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgagcgtggtcgacgaacgtttcgcatggacgggcggtctggcggaccgcctgcccgag
ccggccgatttcgggctcgcgcttgccgaaggtttcgcgcgccggatcgggatgctgtcg
cgccgcgtcggcgcgagcgccgcggccgcgcgctgggcggcgcgcgcggcgttcgccgcg
agccgcgcgacggcggcggggcacgtctgcgtgtcgctgcgcgcgctcgcgcaacgctac
gacgagccgttcgccgacgtgcgcgacgcgctcgccgcgagcggcgtgaccgcgttcgac
agcatcgcgcgcggcgccgagcgtccgctcgtcgtcgaccgcgacggccggctgtatctc
gcgcgctacttcgaatacgagacgcggcttgcgagcgcgctcgtcgcgcgcgcccggtgc
ggcggcgcgcaagcgggcgatgccggcgaattgatgcccgaggcgctcggcgaacggctc
gtccgctatttcgggccgcagaaggagcggggcgtcgactggcagcgcgtcgcggcgctc
gtcgcgctcacgggccgggtgacgatcgtgagcggcgggccgggcaccggcaagacgacg
acggtcgtcggcgtgatcgcgtgtctgctcgacgcgcaccccgacttgcggatcgcgctc
gccgcgccgaccggcaaggcggcgcagcggatgcaggaggcgctgcacgcacgcgccggc
agcctgccggccgagctcgcggcgcgtctgccgcgcacgtcctatacgctgcaccggctg
ctgggcggcggtccgggcgggcgcttcgcgcatcatcgcgacaacccgttgccatacgat
ctcgtcgtcgtcgacgaggcgtcgatgatcgacgtcgcgctcgccgcgcacttgctcgat
gcgctcgcgccgaacgcgcgcctcgtgctgctcggcgacaaggatcagctcgcggccgtc
gaggcgggtgcggtgtttgccgagctgagcgcgcgtcccgcgttcagctcggcgacgtgc
gcgacgattgcgcgcgcgctcggcgtcggagaggccgaattcgtggcggcgctgccgcag
gggggcgttctgcatgcggccgatgcggcgaacgcgggcgcgagcgcggacgcacgcgcg
acttcggtcgacacgggcgcggcggcgctggccgcacgagcgacgggtgccgtcgccgcg
gcgaaggtcgcgccggaagccccggctcagcgcgcgccggcgccgcgcgcgggccggcgc
ggcggcgggcgcgaatcgaaacggggtgtcgacgacgcgcagggatggctgttcgcgttc
gaagacgaagatgcgttcagcgcggaggcgtcaggtgccggtgcgtcaggcgccgatgag
tcgggcgcggaggcgttgggcgtcggtacgtcgggtgccgatgcgcaggatgtcggcacg
tcgagcatcgatcgccgcgacgatcgtgcatcgcttgataccccgcgccgccggcgtgac
gcgctcgccacgcatgttcgagcggattcgccgggcgcgcgcgacattgaaaacgccgcg
tacgtgcacgcacaggccgatgaagccggcgtcgccgatttgccgtgggatgcgtctttc
gccgagcccgccgcgtggatcgaggctggcgaactcgagtggctcgacaacgcggacttt
tcgatatccgaaggcgcttcggcgaatgccggctccgatgagcggcgaaccgcgacggca
acggatgcaagcgccggcggcgcgcgcgcacaggccggccgggtgcccgccgcccacgcc
gggccggatatcgaaccgcaagcgtcggcaccggcgaacccggccggggccccgtcaccg
gacgccgatgccgccgccgcgccgttgaccgactgcgtcatctggctcgaacgcaattac
cgcttcggcctcgactcgccgatcggcaggctgtcgctcgcgatccgccgcggcgccgtg
caggacgcgctcgatgcgttgtcgacggccgacgacgcggccgcgcgctggtgcgacgac
ggcggcgcgacgctgtcggccgcgacggtcgggcaactcgcgcggggcttcgccggctac
gcggccgcgttgcgcgacgcgctcgcgacgcccgatcccgatccgctgccgctcttcgac
gtgctcaaccgctttcgcgtgctctgcgcgacgcgaacgggcgcgcgcggcgcggacgag
gtcaacgcgctcgtcgcggccgaggtgcggcgagcggtgcgcgtgccgctcgcgctcggc
gcgcactggttcgcggggcggcccgtgatggtgacgcgcaacgattacgcgctcggactc
ttcaatggcgacatcggcattgcgctgcccggcgcgcgtggcgcgttgcgcgtctggttc
cgcggcgcggacggccgcgcgcgcgcggtgtcgcccgccgcgctgccgccgcacgatacg
gcgttcgcgctgaccgtccacaaatcgcagggctcggagttcgacgacgcggcgctggtc
ctgcccgcgtcgttcaaccgtgtgctgtcgcgcgagcttgtctacaccgcgatcacgcgc
gcgcgctcgcgcgtgcgcgtgatcggcgcgcgcgcggtgctcgcgctcgcgatcgcgacg
cgcacggcgcgcgattccggtctcgccgcacggatcgccgatgcgctgcgcacacgatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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