KEGG   Burkholderia thailandensis 2002721643: BG87_3287
Entry
BG87_3287         CDS       T03882                                 
Name
(GenBank) hypothetical protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
bthl  Burkholderia thailandensis 2002721643
Pathway
bthl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bthl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BG87_3287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bthl03019]
    BG87_3287
Enzymes [BR:bthl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BG87_3287
Messenger RNA biogenesis [BR:bthl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BG87_3287
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Ric8 DegT_DnrJ_EryC1 CMS1 CARD_2 P-loop_SecA Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: AJX99248
Position
I:3732589..3734037
AA seq 482 aa
MSFASLGLAEPLVRAVNELGYTQPTPIQAQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHAFYAENRGARRAVRALILTPTRELAAQVEESVRAYSKYVKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDVSSLDILVLDEADRMLDMGFIHDIKRVLAKLPA
KRQNLLFSATFSDEIKSLADSLLDSPALIEVARRNTTAETIAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALSEFKNCTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGANGEAVSLVCVDEKQLLRD
IERLIKREISQEVIPGFEPDPNAKPEPIQRRGQRGGNGGGANGGNGGGSAGNAGRGNRAP
RAASQPQAQQGQPAARRDGGTQAKAAKPQARGGGRPAGNGASNGGGAHANRNRSSRSGQR
GR
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgtctttcgcatctctcggtctcgccgaaccgctcgtgcgggccgtcaacgagctgggc
tatacgcagcccacgccaatccaggctcaggccattcccgccgtactgggcggcggcgat
cttctcgccggcgcgcagacgggcaccggcaagaccgccggcttcacgctgccgatcctg
caacgcctgcacgcgttctacgcggaaaaccgcggcgcgcgccgcgcggtgcgcgcgctc
atcctcacgccgacgcgcgagctcgccgcgcaagtcgaggaaagcgtgcgcgcgtacagc
aagtacgtgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gacgcgttgaagcgcggcgtcgacatcgtcgtcgcgacgccggggcgcctgctcgatcac
atgcagcagaagacgatcgacgtatcgagcctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccggcg
aagcgccagaacctgctgttctcggccaccttctccgacgagatcaagtcgctcgcggac
agcctgctcgattcgcccgcgctgatcgaggtcgcgcgccgcaacacgacggccgagacg
atcgcgcagaagatccacccggtcgatcgcgatcgcaagcgcgaactgctcacgcatctg
atccgcgagcacaactggttccaggtgctcgtgttcacgcgcacgaagcacggcgcgaac
cggctggccgagcaactgacgaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcgcgcacgcgcgcgctgtccgagttcaagaactgcacgctgcaggtgctc
gtcgcgaccgacatcgccgcgcgcgggatcgatatcgatcaattgccgcacgtcgtgaac
ttcgatctgccgaacgtccccgaggactacgtgcaccgaatcggccgcaccggccgcgcg
ggcgcgaacggcgaggcggtgtcgctcgtgtgcgtcgacgaaaagcagttgctgcgcgac
atcgaacggctcatcaagcgcgagatttcgcaggaagtgatcccgggcttcgagccggac
ccgaacgcgaagccggagccgatccagcggcgcgggcagcgcggcggtaacggcggcggc
gctaacggcggtaacggcggcggtagcgcaggaaacgccggccgcggcaatcgcgcaccg
cgcgcggcgagccagccgcaggcgcagcagggtcagcccgccgcgcggcgagacggcggc
acgcaggcaaaggccgccaagccgcaggcacgcggcggcggacggccggcgggcaatggc
gcttcgaacggcggcggcgcgcatgcgaaccgcaaccgttcgtcgcgcagcggccagcgc
ggccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system