KEGG   Brochothrix thermosphacta: CNY62_07155
Entry
CNY62_07155       CDS       T05089                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
bths  Brochothrix thermosphacta
Pathway
bths03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bths00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNY62_07155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bths03400]
    CNY62_07155
DNA repair and recombination proteins [BR:bths03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CNY62_07155
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CNY62_07155
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA AAA_7 AAA_22 AAA_30 AAA_5 AAA_16 AAA_25 DUF87
Other DBs
NCBI-ProteinID: ATF26186
UniProt: A0A1D2LJC5
Position
1487383..1489344
AA seq 653 aa
MGNETFKLESPYQPAGDQPRAIEKLVKNLKNGVKQQTLLGATGTGKTFTVSNVIRDLNKP
TLVIAHNKTLAGQLYSEFKEFFPENAVEYFVSYYDFFQPEAYVPSKDLYIEKDSSVNDEI
DQLRHSATASLLERRDTIVIASVSCIYGLGDPKSYFDRLISLREGMEIERNTLLRRLVDI
QFERNDIDFQRGRFRVRGDVVEIFPASRSERCLRIEFFGDEIERIREMDALTGEIIADRE
HVTIFPATHFVTAPEKMEVAMQNIRVELAEQLKYFRDEGKLIEAQRLEQRTNYDLEMLEE
IGYCSGVENYSRQIELRPPGSTPHTLIDYFPDDFQIIIDESHVTMPQIRGMFNGDQARKQ
MLVDYGFRLPSALDNRPLRLEEFEEHVNQITYISATPGPYELEQNPDVIEQIIRPTGLLD
PEVEIRPIDGQIDDLIGEINKRIEVDERVLITTLTKRMSEDLTDYLKELGIKVQYLHSEV
KTIERLEILQDLRRGKFDVLVGINLLREGIDIPEVSLVAILDADKEGFLRSERSLIQTMG
RAARNANGHVLMYANRITDSMQKALDETERRRIIQKAYNEEHGITPTTIKKAIHEVVSAG
NTDVVEEVEEVIDTRTIAELEDDMKEAARMLDFETAAAIRDKILALKTSDEEE
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgggtaacgagacatttaaattagaatcaccgtatcaacctgcgggtgatcaaccacga
gcaattgaaaaattagtgaaaaacctgaaaaatggcgttaaacagcaaactttgttaggc
gcaacaggaacagggaaaacatttactgtctcgaatgtgattcgagatttaaataagccg
acccttgtcatcgctcacaataaaacgttagcagggcaactttatagtgagttcaaggag
ttctttccggaaaacgctgtggagtattttgttagttattatgatttttttcaaccagaa
gcctatgtgccatcaaaagatctttatattgaaaaagattcgagtgtgaatgacgaaatt
gatcaactgcgacattctgctaccgcctcattactagagcgtcgcgatacaattgttatt
gccagtgtatcttgtatctatggtttaggggatccaaaatcttattttgatcgtctgatt
tctttacgtgaagggatggaaattgaacgcaatacattattgcgtcgtttggtcgacatt
caatttgaacgtaacgacattgattttcaacgcgggcgttttcgtgtgcgcggggatgtt
gtggaaattttcccagcttcacgtagtgaacgttgtttgcgtattgaattttttggcgat
gaaatcgaacgaattcgtgaaatggatgccttaacaggcgaaataatcgctgaccgtgag
catgtaacgattttccctgcgactcactttgtgacagcacctgaaaaaatggaagtagcg
atgcaaaatatccgtgttgagttggctgaacagctcaaatactttcgtgatgaaggaaag
ttaattgaagcgcaacgtttggaacagcgcacaaactatgatttagaaatgttggaagaa
attggttattgttcaggagtggaaaactattcacgacaaattgaattacgcccgccaggt
tcaacacctcatacattgattgattactttccagatgatttccaaattattatcgatgaa
tcgcatgtgacaatgccgcaaattagagggatgtttaatggggatcaagcgcgtaaacaa
atgcttgtcgattatggcttccgtttaccatcagcacttgataaccgcccgttacgcttg
gaagaattcgaagaacacgtcaatcaaattacttatatttcagcaacaccaggtccttat
gaattggaacaaaatccagatgttattgaacaaattattcgtccgacaggtttgcttgat
cccgaagttgaaatccgtccaattgatggtcaaattgacgatcttattggtgaaattaat
aagcggattgaagtggacgaacgggtattaattacaactttgacaaaacgaatgtcggaa
gatttaacagattatctcaaagagttaggcattaaagtgcagtacctccattcagaggtg
aagacgattgaacgtttagaaatattacaagatttacgtcgtggtaagtttgatgtgtta
gttggaattaacttgttaagagagggaattgatattccagaagtttctcttgttgccatt
ttagatgccgataaggaaggtttcttacgttctgagcgctcacttattcaaacgatggga
cgcgcggctcgtaatgccaacggtcacgtgttaatgtatgcgaatcgtattactgattcg
atgcaaaaagcattggatgaaacggaacgtcgtcgtattattcaaaaagcttataatgaa
gaacatggtattacaccaacgacgattaagaaagcgattcacgaagttgtttctgcgggt
aatacggatgtcgttgaagaggttgaagaagtaatcgatacacgtacaatcgcggaatta
gaagatgacatgaaagaggcagcccgtatgctcgattttgaaacggctgcagcgattcgt
gataaaatattagcactcaaaacaagtgatgaagaagagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (25)   

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