KEGG   Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch2088
Entry
H175_ch2088       CDS       T02474                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
btht  Bacillus thuringiensis serovar thuringiensis IS5056
Brite
KEGG Orthology (KO) [BR:btht00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btht03021]
    H175_ch2088
Transcription machinery [BR:btht03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H175_ch2088
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF YqhG GerE HTH_23 DUF2660 HTH_24 Xre-like-HTH
Other DBs
NCBI-ProteinID: AGG00801
UniProt: M1QEE0
Position
2072282..2072818
AA seq 178 aa
MKAEIDYAHLIRLTLSGNKEAYSELYDVTIQEVYKTAHFLIEDKTDVDDVVQEVYIQLYE
SLRKYDSEKPFRPWLIGLAIKQIHSYRRKRWMRLRIMKKAEEQRKPVQIDFSNDVVSKIS
NQKLIELIHKLPYKLKQVIILRYLYEYSQEEVAQILHIPIGTVKSRIHAALKKLRQKE
NT seq 537 nt   +upstreamnt  +downstreamnt
atgaaggctgaaatagattacgcacatttaattcgattaactttatcaggaaataaagaa
gcgtatagcgaattgtatgatgtaacgattcaagaagtatataaaacagcacatttttta
attgaagataaaacggatgtagatgatgtcgttcaagaagtatacatacagctatatgaa
tcgcttcgtaaatatgatagcgagaagccatttcgcccttggctaattgggcttgcgatt
aaacaaattcattcttatagaagaaagaggtggatgcgactacgaattatgaaaaaagca
gaagagcaaagaaagccagtgcaaattgatttttctaacgatgttgtaagtaaaatatca
aaccaaaaactaatcgaactcattcataaattaccgtataaattgaaacaagttattatc
ttaagatacttatacgaatattcacaagaagaagtagcacaaatattacatattccaatt
ggtacagtgaagtctagaattcatgcggcattaaagaaactacgtcaaaaagagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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