KEGG   Caldibacillus thermoamylovorans: CQJ30_13575
Entry
CQJ30_13575       CDS       T06263                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bthv  Caldibacillus thermoamylovorans
Pathway
bthv03030  DNA replication
bthv03430  Mismatch repair
bthv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bthv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CQJ30_13575
   03430 Mismatch repair
    CQJ30_13575
   03440 Homologous recombination
    CQJ30_13575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bthv03032]
    CQJ30_13575
   03400 DNA repair and recombination proteins [BR:bthv03400]
    CQJ30_13575
Enzymes [BR:bthv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CQJ30_13575
DNA replication proteins [BR:bthv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CQJ30_13575
DNA repair and recombination proteins [BR:bthv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CQJ30_13575
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C tRNA_anti_2
Other DBs
NCBI-ProteinID: AWI13099
UniProt: A0A2U8EE23
Position
complement(2779718..2783065)
AA seq 1115 aa
MPMVPLHMYSAYSLLSSTIQPEKMVMAAKQRGFHALAITDQNVLYGVIPFYKACRTYGIQ
PIIGLEADILIEEEYETTAYPLLFYAKNLHGYQNIMKISSAIQTKSPKGIPIKWLKHYCS
GLIAISPGIEGEIETYILQGQEGRAKEIVSFYQQLFEKESFYLSIQSLPSRDHETLRKAI
YSMSEEMNIPVAAVDKVCFLDKEDYFSWKCLQAIKENINISELTEDALDKEGYLRTNEEL
NSLFQQYPEAIENTLKIAEQCQVEIPFHQQLLPKYPLDEKTSDVFLSELCEKNLSIRIDS
PTPIYKERLKYELAIIKKMKFSDYFLIVWDYVQFARKNGIIVGPGRGSAAGSLVAYVLEI
TDVDPIKFDLLFERFLNPERVSMPDIDIDFPDHRRDEVIQYVAKKYGSTHVAQIITFGTF
AAKAAVRDVARVFGRTNKELDQLSKSIPNKLGITLKEAMKESQALQDLMKNENFQQIFQI
AAKIEGLPRHTSTHAAGVVIGDRPLVEWIPLQTGSNDVLLTQYPMGTLEEIGLLKMDFLG
LRNLSLIESIIRSIHKKQQKKIDLKQIPFHDEKTFKLLQKGQTTGIFQLESEGMRDVLIR
LKPTEFEDIVAVNALYRPGPMTNIPVYINRKHGKEPVRYPHPDLENILKKTYGVIVYQEQ
IMQIASKMAGFTLGEADLLRRAVSKKKREVLDQQRQHFVAGAKNNGYSETTANEIYDLIV
RFADYGFNRSHAVAYSMISYQLAYLKAHYPLYFMASLLTSVVGNENKTAEYIKELKHLGF
TIYPPSINHSYYQFQVERDGVRFSLAAIKGVGFQALKEIIQARGERPFTDLFDFCLRVSL
KVVNRKVLENLIHAGSFDEFGHDRAVLLATLDVAIEHAQLMKPDDHQIDSLFSEELDIRP
KYVEVEPIPIDKKLQFEKQVLGLFISRHPVSMYRKLLQSQGALLLDELKIAGSKYHVGAY
IQEVRKTRTKNGEAMAFLQISDESQDMSAVVFPNVYRTSSALVKKGEIVFMTGTLDFRHG
QKQFIVNFIQSVEKLREEQESKKVYIKIDANHQTNELLGELKNMIKKYKGSVPIILYYEK
NHQTVQLAKEHWINPDSAAISELKKLLGEHNVAIK
NT seq 3348 nt   +upstreamnt  +downstreamnt
ttgcctatggtacctttacatatgtacagtgcctattcacttttatcaagtacaatccaa
cctgaaaaaatggttatggcagcaaaacaaagaggattccatgcactggcaattacggat
caaaatgttctttacggtgtcatccctttttataaagcatgccggacctatggtatacaa
ccgatcattggactagaagctgatattttaattgaagaggaatacgaaacgaccgcctat
ccgctgcttttttatgcaaaaaatttacatgggtaccaaaacataatgaaaatttcgagt
gctattcagacaaaatctccaaaaggtatcccaatcaaatggcttaaacattattgttca
ggtttgatcgccatttctcccggtattgaaggagaaattgaaacgtatattctgcaaggg
caagaaggacgtgcaaaggaaatagtcagcttctatcaacaattatttgagaaagaatcc
ttctatttatcaattcagtcattaccatcccgggatcatgaaacgttaagaaaagcgatt
tatagtatgagtgaggagatgaatatacccgtcgcagctgtcgataaagtttgttttctg
gataaagaagattatttttcatggaaatgtttgcaggcgatcaaagagaatataaatatt
tccgagttgactgaagatgctttggataaagaaggttacttgcgtacaaatgaagagctg
aacagcttatttcaacaatacccggaagcaatcgaaaacactttgaaaattgcggaacag
tgtcaagttgaaattccctttcatcaacaattattgcctaaatacccgcttgatgaaaaa
acaagcgatgtgtttttaagtgaactgtgtgaaaaaaatttatctattagaatcgattca
ccaactccgatttataaagaacgactgaaatatgaacttgccattattaagaagatgaag
tttagtgattattttttaatcgtttgggattatgttcaatttgccagaaaaaatggtatt
attgtcggaccgggcaggggatcggcagccggaagtcttgttgcttatgttcttgaaata
acggatgttgacccgattaaatttgatctgttgtttgaaaggtttttgaatcctgagcgg
gtgtcgatgccggatattgatatcgactttcctgatcacaggcgcgatgaagttattcag
tatgtggcgaaaaaatatggatctacccatgtggctcaaattattacttttggtacattt
gcggctaaagcagctgtaagggatgttgcccgcgtttttggaagaacaaataaggaattg
gatcaattatcgaaaagcataccgaacaaattaggaatcactttaaaggaagcgatgaaa
gagtcccaagctttacaagatttaatgaaaaacgaaaactttcagcagattttccaaatt
gccgcaaaaattgaaggattaccgcgccatacttcaacacatgcagccggggttgttatc
ggggacagaccactggttgaatggattcctttacaaacaggatcaaatgatgttttgctg
acccaatacccgatgggaaccttggaagaaatcggtttattaaagatggatttccttgga
ttacgaaatttatcacttatcgaatcaatcattcggtccattcacaagaaacaacagaaa
aaaattgatttaaaacaaattccttttcatgatgaaaaaacttttaaactgttacaaaaa
ggtcagacaacagggatttttcaattggaatcggaaggaatgcgagatgtgttaatacgc
ctgaaaccgacggaatttgaggatattgttgctgtcaatgcgttgtatcgtccgggaccg
atgacaaatattcctgtctatattaatcgaaaacatggaaaggaaccggtccgttatcca
catcctgacttggaaaatattttaaagaaaacatatggagtcatcgtatatcaggagcaa
attatgcaaattgcttccaaaatggcaggttttacattaggggaagcagatttacttaga
agggcggtttcaaaaaagaagcgggaagttttggatcaacaaaggcaacattttgtagcc
ggtgccaaaaataatggctattcggaaacaacggcaaatgaaatatatgatttgattgtc
cgctttgccgattatggttttaatcgcagtcatgccgttgcctacagcatgattagttat
caactcgcatatttaaaagcccattatccattgtatttcatggcaagtttattaacttcg
gtcgtaggaaatgaaaataaaaccgctgagtacattaaagaactgaaacatctaggattt
actatttatccaccatccattaatcacagctattatcaatttcaagttgagcgtgatgga
gttcgttttagcttggctgcgattaaaggagtcggttttcaagcattaaaagagattatc
caagctaggggggaacggccgtttaccgatttatttgatttctgtttacgtgtttcactt
aaagtcgttaaccgaaaagtgttggaaaacttgattcatgccggaagttttgacgaattt
gggcatgaccgggcagtcctgttggcaactttggatgtggcgattgaacatgctcaatta
atgaaacccgacgatcatcaaattgactcattattttcagaagaactggatattaggccg
aaatatgttgaagttgaaccgattcctattgataaaaaattacaatttgaaaagcaggtt
ttaggtttatttatttcaagacatccggtcagcatgtatcgcaagctgcttcaaagtcaa
ggtgctctgttactggatgaactgaaaattgccggatcaaaatatcatgtcggcgcttat
attcaagaagtacggaaaacaagaacaaaaaatggtgaagcaatggcttttttacaaatt
agtgatgaatcgcaagacatgtcagcagtcgtttttccgaatgtttatcggacatcttca
gccttagtaaaaaaaggagaaattgtttttatgaccggtacgcttgattttcgacatggt
caaaagcaatttatcgttaatttcatccaatccgttgaaaaattgcgagaagaacaagaa
agtaaaaaggtgtatattaaaattgatgcaaatcatcaaacgaatgaattattaggggaa
ttgaagaatatgattaaaaaatataaagggagtgtgccaatcattctttattatgaaaaa
aatcatcagaccgtccagttggcaaaagagcattggattaatccggacagtgcagctatc
tcagaattaaaaaaattattgggagaacataatgttgccataaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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