KEGG   Bacillus thuringiensis MC28: MC28_E117
Entry
MC28_E117         CDS       T02263                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
btm  Bacillus thuringiensis MC28
Pathway
btm02024  Quorum sensing
btm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MC28_E117
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MC28_E117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btm03019]
    MC28_E117
   03036 Chromosome and associated proteins [BR:btm03036]
    MC28_E117
Messenger RNA biogenesis [BR:btm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     MC28_E117
Chromosome and associated proteins [BR:btm03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    MC28_E117
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: AFU17376
Position
pMC189:complement(123136..123357)
AA seq 73 aa
METKFQAFQKNMLSLQEQLLQEALQKRKDITLILLKGLHVKGMIRGFDTYSVLMEFEGKQ
QLIYKHAISTIRF
NT seq 222 nt   +upstreamnt  +downstreamnt
ttggaaacgaaatttcaagcatttcaaaagaacatgctatctttgcaggaacaattgtta
caagaggcgttacaaaagaggaaggatatcacgttaattttgttaaaaggattgcatgta
aaaggtatgataagaggatttgatacgtattctgttttaatggaatttgaaggaaagcag
cagcttatatataaacatgcaatctccacgattcgattctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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