KEGG   Bibersteinia trehalosi USDA-ARS-USMARC-192: WQG_10300
Entry
WQG_10300         CDS       T02504                                 
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
bto  Bibersteinia trehalosi USDA-ARS-USMARC-192
Pathway
bto03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    WQG_10300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bto03400]
    WQG_10300
DNA repair and recombination proteins [BR:bto03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WQG_10300
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      WQG_10300
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 UB2H DUF87 DUF5683 EAD9 FlaG
Other DBs
NCBI-ProteinID: AGH38307
Position
1107157..1109175
AA seq 672 aa
MSKNSKPFILHSPFKPSGDQPTAIAKLTEGLNDGLAHQTLLGVTGSGKTFTIANVIAQLN
RPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPASDTFIEKDASINE
QIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQMMLHLQVGAMIGQREILSRLA
ELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVELFDDEIENLSLFDPLTGHSLGK
VPRYTIYPKTHYVTPRERILEAIEQIKVELAERRTYFIKENKLLEEQRIAQRTQFDIEMM
NELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPADGILVIDESHVTVPQIGGMYRGDRAR
KETLVQYGFRLPSALDNRPLRFEEFERLSPQTIYVSATPGAYELEKNPDVVDQVVRPTGL
LDPIIEVRPVATQVDDLLSEIHKRVAVDERVLVTTLTKKMAEDLTDYLDEHGVRVRYLHS
DIDTVERVEIIHDLRMGMFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT
IGRAARNLNGKAILYGDRITNSMQKAITETERRREKQMKYNEEHGITPQALNKKVGELLD
IGQSDKPKRGKQAVKKAENSASDYKPKSRKELEKELKTLEQQMRDFAKDLEFEKAAAVRD
NIRILNAHLLEI
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgagtaaaaacagcaaaccctttattctccattctcctttcaaaccctccggtgatcag
ccgactgccatcgctaaactgaccgaaggcttaaatgacggcttggcccatcaaacctta
cttggcgtaaccggctcgggcaaaacctttaccattgcgaatgtgatcgcccagcttaac
cgccctgcgatggtgcttgccccgaataaaacccttgccgctcagctttatgccgagatg
aaagcgttttttccggaaaatgcggtggagtatttcgtctcttactacgactactaccag
cccgaagcctatgtgccggcaagcgatacctttatcgagaaagatgcctctatcaatgag
cagatcgagcagatgcgactttcggcaaccaaatcctttttggagcgccgagatacgatt
gtggttgcctccgtttctgccatttacggcttgggtgatgtggacgcttatatgcagatg
atgttgcatttacaagtgggggcgatgattgggcagcgtgaaattctctctcgccttgcc
gaattgcaatacacccgcaacgatcaggcgtttcagcgttcgactttccgagtgcggggc
gatgtgattgatatttacccagcggagagcgatgaagtggcgttaagggtagagctgttt
gacgatgaaatcgaaaatctgtcgctatttgacccgcttacagggcatagcttgggcaaa
gtgccacgctataccatttacccgaaaacccactatgtgaccccacgagagcggattttg
gaggcaatcgagcaaattaaggtcgagcttgccgagcgccgcacctatttcatcaaagag
aataaattgctggaagagcagcggatcgcccaacgtacacagtttgatatcgagatgatg
aatgagctaggctactgttcgggcattgaaaactactcccgctatctctcgggcagaaaa
gagggtgaagccccaccgaccctgtttgattatatgccggcggacggtattttggtgatt
gatgaaagccacgttaccgtgccacaaattggcggaatgtatcgaggcgaccgagccaga
aaagagacgctggtgcagtacggtttccgcttgccatcggcactggataaccgtccgttg
agatttgaagagtttgaacgcctttcaccgcagacgatttacgtttctgccacaccgggg
gcgtatgaattggagaaaaaccctgatgtggtggatcaagtggttcgcccaaccggcttg
cttgacccgattatcgaggttcgccccgttgccacgcaggtggatgatttgctatctgaa
attcacaaacgagtggcggtggacgaacgggtgctggtgaccacgcttaccaaaaaaatg
gcggaagatctcactgattatttggacgaacacggcgttcgagttcgctatctacatagc
gacattgacacggtagaacgggtggaaattatccacgatttgcgaatgggtatgtttgac
gtgttggttggcattaacttgttgcgagaaggcttagatatgcccgaagtgtcgctcgtg
gcaattctcgatgccgataaagagggctttttgcgttccgaacgctcgttaattcagact
atcggacgtgccgctcgaaatctcaacggtaaagcgattttatacggcgaccgcattacc
aactcaatgcaaaaagcgattactgagaccgaacgccgccgtgaaaagcagatgaaatat
aacgaagaacacggcatcaccccgcaagcattgaacaaaaaagtcggcgaattgctcgat
atcggacaatccgacaagccaaaacggggcaaacaagcggtcaaaaaagccgaaaattct
gcaagcgactacaagccgaaatcccgcaaagaattggaaaaagagcttaaaacgctggaa
caacagatgcgtgattttgcgaaagatctggaatttgaaaaagcggctgcggtgagggat
aatataagaatattaaatgcacatcttcttgaaatatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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