KEGG   Bibersteinia trehalosi USDA-ARS-USMARC-192: WQG_13280
Entry
WQG_13280         CDS       T02504                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bto  Bibersteinia trehalosi USDA-ARS-USMARC-192
Pathway
bto03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bto00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WQG_13280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bto03019]
    WQG_13280
   03016 Transfer RNA biogenesis [BR:bto03016]
    WQG_13280
Enzymes [BR:bto01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     WQG_13280
Messenger RNA biogenesis [BR:bto03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     WQG_13280
Transfer RNA biogenesis [BR:bto03016]
 Prokaryotic type
  tRNA degradation factors
   WQG_13280
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 aRib S1_2 SLS1_KH2 UPF0181
Other DBs
NCBI-ProteinID: AGH38605
Position
complement(1474487..1476625)
AA seq 712 aa
MLNPIVRQFKYGQHTVTLETGAIGRQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLT
VDYQERTYAAGRIPGGFFKREGRPSEGETLVARLIDRPVRPLFPEGFFNEIQVIATVMSV
NPQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQLVLNPTTSEQKISRLDLVVA
GTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENIKEFVKEAGKPRWDWVAPEPNT
DLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAETIAAIIGEDETISEGAIVDIFTAL
ESQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLGTER
DAQIIDELTGEKSDRFLFHYNFPPFSVGETGRIGSPKRREIGHGRLAKRGVLAVMPTAEE
FPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSD
ILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVMEQA
IPAPRADISDYAPRIHTMKIDPKKIKDVIGKGGATIRALTEETNTSIDIDDDGTVKIAAT
DGNAAKAVMARIEEIVAEVEVNQIYNGKVTRVVDFGAFVSILGGKEGLVHISQITDTRVE
RVSDYLSVGQEVQVKVVEIDRQGRIRLTMKDLNAAAETETVEQENSQSDIVE
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgcttaatcctattgtaagacaatttaaatacggtcagcataccgtaaccttggaaacg
ggggctattggtcgtcaagcaactgctgccgtcatggcaagtatggacgacaccacggtt
ttcgtgactgtggttgcgaaaaaagacgtaaaagaaggtcaagatttctttcctttaacg
gttgattatcaagaacgtacctatgcagcaggtcgtatccctggtggtttctttaaacgt
gaaggcagaccatcagaaggtgaaaccttagttgctcgtttgattgaccgtcctgttcgc
ccacttttccctgaaggtttctttaacgaaatccaagtcatcgcaaccgtaatgtcagtg
aatccacaaattagcccagatttagtggcaatgatcggtgcatcggcagcgctttcttta
tcaggtgtaccatttaatggcccaatcggtgcagctcgtgttggttttattaacgatcaa
ttagtattaaacccaacgactagcgaacaaaaaatcagccgcttagatttagtggttgct
ggtacagataaagccgtattgatggtggaatcagaagcagatattttaactgaagaacaa
atgcttgcagcggtagtgtttggtcatgaacagcaacaagtggtgattgaaaatatcaaa
gagttcgtgaaagaagcaggcaaaccacgttgggattgggttgcaccagaaccaaatacc
gatttaattaataaagtgaaagcattagctgaaactcgtttaggtgatgcgtaccgtatc
gttgaaaagcaagtgcgttatgaacaaattgatgcaattaaagcagaaacaattgcagca
atcattggcgaagatgaaaccatttcagaaggcgctatcgttgatattttcacggcatta
gaaagccaaatcgtgcgtagccgtattattgcgggcgaaccacgcattgacggtcgtacg
gtagataccgtgcgtgccttagatatttgtactggcgtattaccacgcactcacggttct
gcacttttcactcgtggcgaaacccaagcattagctgtagcaacattaggtacagaacgt
gatgcacaaatcattgatgaattaaccggcgaaaaatccgatcgtttcttattccactac
aacttccctccattctcagtcggtgaaaccggccgtatcggctcaccaaaacgccgtgaa
attggtcatggtcgtttagcaaaacgtggtgtgttagcggtgatgccaactgcggaagag
ttcccgtatgtagtgcgagtggtgtctgaaatcaccgaatctaacggttcttcttcaatg
gcatctgtatgtggtgcttctcttgcgttaatggatgcaggtgtgccaatcaaagcagcg
gttgcgggtatcgcaatgggactcgtgaaagaagacgagaaattcgtagtactttccgat
attttaggtgatgaagaccacttaggcgatatggactttaaagtggcaggaactcgcact
ggtgtaacagcactgcaaatggatattaaaattgaagggatcacccctgaaattatgcgt
attgccttaaaccaagccaaaggtgcaagaatgcacattttaggcgtgatggaacaagcc
attccggcacctcgtgcagatatttctgactatgcgccacgcattcacaccatgaagatc
gatccgaagaaaatcaaagatgtgattggtaaaggcggtgcgacaattcgtgctttaacc
gaagagaccaatacttctattgacattgatgatgatggtacagtgaaaattgcggcaact
gacggtaatgcagcgaaagcggtaatggctcgcattgaagagatcgttgccgaagtggaa
gtaaaccaaatctataacggtaaagtaacccgtgtggtggacttcggtgcattcgtttca
attttaggtggcaaagaaggcttggtacacatttcgcaaatcacagatactcgtgtagaa
cgtgtgtctgattacctcagtgtcggtcaagaggtgcaagtgaaagtggtggaaattgac
cgtcaaggcagaatccgtttaacgatgaaagatttaaatgccgcagcagaaacagaaact
gttgagcaagaaaattctcaatcagatatcgttgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system