KEGG   Bifidobacterium thermophilum: D805_0718
Entry
D805_0718         CDS       T02505                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
btp  Bifidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:btp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:btp03016]
    D805_0718
Enzymes [BR:btp01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     D805_0718
Transfer RNA biogenesis [BR:btp03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    D805_0718
SSDB
Motif
Pfam: Radical_SAM UPF0004 B12-binding
Other DBs
NCBI-ProteinID: AGH40985
UniProt: M4RC11
Position
902636..904087
AA seq 483 aa
MMTEAERASRPAAGQSGNVRPDGRGKGVFYIHTLGCQMNVHDSERIAGVLEQDGYVPASE
CQIAQHDFDLVVMNTCAVRENAAERMYGTIGRWARYKHANPRVQIAIGGCMAQLDRERIA
KRTPWVDAVFGTKSIASLPRLLDQARATGEPQIDVANDLTYFPSQLPAARSSRISSWVSI
SVGCNNTCTFCIVPTTRGREHDRRPGDVLAEVRECVANGAKEVTLLGQNVNSYGYGMGDR
YAFSKLLRACGQVEGLERVRFTSPHPAAFTDDVIDAMAQTPNVMHQLHMPLQSGSDRVLR
AMRRSYRTERFLTILSKVREAMPDARISTDIIVGFPGETEEDFQRTLDVVEQARFSTAFT
FEYSPRPGTPAAAMEQIPKQVVQERFDRLLALQQRITQEELDKFEGRDVEVMVTGTHGKK
DDETHRVTGRERTGALVHIGVPEGCPQPQVGDFVTATVTHAGEHNLIADPDPQAGQTYRV
RRG
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgatgaccgaggcggagcgcgcctcgagaccggctgccgggcagtcggggaatgttcgg
ccggacggccgcggcaagggtgtgttctatattcatacgctcggctgtcagatgaatgtg
cacgattccgagcgcatcgcaggcgtgctggagcaggacgggtatgtgccggcgagtgaa
tgccagatcgcacagcatgatttcgatcttgtggtcatgaacacctgcgcggttcgagag
aacgccgctgaacgcatgtacggcaccatcggacgctgggcgcgctacaagcatgcgaat
ccgcgcgtgcagatcgcaatcggcgggtgcatggcccagctggaccgcgagcgcatcgcc
aaacggaccccgtgggtcgatgcggtgttcggtacgaaaagcattgcctcacttccgcgt
ctgcttgaccaagcgcgcgcgaccggcgagccgcagatcgatgtcgccaacgacctgact
tatttcccgagccagttgccggctgcccgttcctcgcgtatctcctcgtgggtgtcgatt
tcggtggggtgcaacaacacgtgcaccttctgcatcgtgccgaccacccgcggtcgcgag
catgaccggcgcccgggcgatgtgctcgccgaggtgcgcgagtgcgtggccaacggcgcc
aaagaggtgacactgttggggcagaacgtcaactcgtacggctacgggatgggggaccgg
tatgcgttctccaagctgttgcgtgcctgcgggcaggtcgaggggctggagcgcgtccgg
ttcacctcgccgcaccccgctgcattcaccgacgatgtcatcgacgcgatggcccaaacg
ccgaacgtgatgcaccagctgcacatgccgttgcaatcgggctccgatcgtgtactgcgc
gccatgcgccgctcgtaccgtacggaacggttcctgaccatcctgtccaaagtgcgggag
gcgatgcctgacgcccgtatctccaccgacatcatcgtcggattcccaggggagaccgag
gaggatttccagcgtacgctcgacgtggtcgaacaggcgcggttctcgaccgccttcact
ttcgaatattcgcctcgcccgggcaccccggccgctgcgatggaacagattcccaagcag
gttgtccaggagcgctttgaccgtctgctcgctcttcagcaacggatcacccaggaggag
cttgacaagttcgaagggcgtgatgtggaggtcatggtcaccggaacccatggcaagaag
gacgatgagacacatcgggtcaccggccgtgagcgcaccggtgcgttggtgcatatcggc
gtgcctgaaggctgcccgcagccgcaggtcggtgattttgtgacggcgaccgtcacccac
gccggtgagcataatctgattgccgaccccgatccgcaggcggggcaaacctatcgggtc
cgtcgcggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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