KEGG   Bifidobacterium thermophilum: D805_1053
Entry
D805_1053         CDS       T02505                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
btp  Bifidobacterium thermophilum
Pathway
btp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:btp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    D805_1053 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:btp03400]
    D805_1053 (ruvB)
Enzymes [BR:btp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D805_1053 (ruvB)
DNA repair and recombination proteins [BR:btp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     D805_1053 (ruvB)
    RecFOR pathway proteins
     D805_1053 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA TIP49 AAA_5 AAA_16 AAA_22 AAA_14 Mg_chelatase nSTAND3 TsaE AAA_18 RNA_helicase AAA_3 Zeta_toxin NTPase_1 AAA_17 Sigma54_activ_2 AAA_25 Rad17 AAA_33 IstB_IS21 AAA_19 NB-ARC AAA_28 NACHT POTRA_2 AAA_24
Other DBs
NCBI-ProteinID: AGH41320
UniProt: M4RCW2
Position
complement(1303322..1304386)
AA seq 354 aa
MRQSEDTTVNNDGAREESLRMVSSQPLDSEPVSDEELRPHVLEGFIGQPRLKAQLQLFLD
AARKREVPPDHILLAGPPGLGKTTLAMIVANELGVPIRVTSGPAIQHAGDLASILSSLDA
GEVLFIDEIHRLPRPAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGATTREGM
LPSPLRARFGFTAHLDFYPHEELEKLIERSASVLGVELEEGAAHQLSLRSRGTPRIANRL
LRRVRDWAIVHDLESVDVDAVTQALALYQIDSEGLDRLDIAVLQAICRNFNGGPVGLNNL
SAMVGEESETVETVCEPYLVREGFLVRTPKGRVATAKAWRHLGLEPQDDVNKLF
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgcgacaatctgaagacacgacggtgaataatgatggcgccagggaagaatccctgcgt
atggtatcttcgcagccattggacagcgagccagtgagcgatgaggagctgcgtccccat
gtccttgaagggttcatcgggcagccacggctcaaagcacaattgcagctgttccttgac
gcagcacgcaaacgtgaggttcccccggaccatatcctcctggcgggccctccaggactg
ggcaagaccacacttgccatgattgttgccaacgaactgggcgtgccgatcagggtaact
tcggggcctgccatccagcatgcgggggatctcgcatccattctcagctcgttggacgcc
ggagaagtgctgttcatcgacgagatccatcgtctgcctcggccggcagaggagctgctg
tacatcgccatggaggatttccgtgtcgatgtcatggtcggcaaggggcccggtgcatca
tccatcccgttgactttgccgcgcttcacggtgattggcgccaccacaagggaaggcatg
ttgccttcgccgcttcgggcgcgtttcggttttaccgcgcatctggatttctatccacat
gaggagttggagaaactcatcgagcggtccgcttcggtgcttggcgtggaattggaagaa
ggcgcggcgcatcagctatccctgagatccagagggacgccgcgtatcgcgaaccggttg
ctgcgtcgtgtgcgcgactgggcaatcgtccatgatttggaaagtgtggacgtcgatgcg
gtcactcaggcgctggctctgtaccagatcgattccgaaggattggacagactcgatatt
gccgtattgcaggcaatctgccgtaatttcaacggcggaccagttggcttgaacaatctg
tcggcgatggtgggcgaggaatcggaaaccgtggagacggtatgtgagccgtatcttgtc
cgcgagggattcctcgtacgcactccgaaaggccgtgtcgcaacggctaaggcctggaga
catctcggccttgaaccccaggatgatgtcaacaagctattctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (39)   

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