KEGG   Burkholderia thailandensis 2002721723: BTQ_2214
Entry
BTQ_2214          CDS       T03111                                 
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
btq  Burkholderia thailandensis 2002721723
Pathway
btq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BTQ_2214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btq03019]
    BTQ_2214
   03009 Ribosome biogenesis [BR:btq03009]
    BTQ_2214
Enzymes [BR:btq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     BTQ_2214
Messenger RNA biogenesis [BR:btq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BTQ_2214
Ribosome biogenesis [BR:btq03009]
 Prokaryotic type
  rRNA processing factors
   BTQ_2214
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AHI73816
Position
1:2523525..2526740
AA seq 1071 aa
MKRMLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVVTRIEPSLEACFVNY
GEDRHGFLPFKEVARQYFKEGVDMRSARIQDALREGQELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGDERQELRETMAQLQIPDGMSMIARTAGIGRSAEELQ
WDLNYLLQLWRAIEAASQSGHPGQPMLIYLESSLVIRAIRDYFQPDIGEILIDTTEIYDQ
ARAFMDIVMPDNVGKVKRYHDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALV
AIDVNSARATKGADIEETATRTNLEAADEVARQLRLRDLGGLIVIDFIDMESAKSQREVE
QRLKDALKHDRARVQMGKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRDTESSA
LQVLRIIQEEAMKENTAAIHCQVPVEVTAFLLNEKRQEINKIESRFKVGVVLIPNKHLDT
PHYKLERLRHDDARLDDPRASWKMAEEAARELEAETGYSKRAEETKPRQEAAVKGITPER
PAPSPAPQRQSAPEAAAPVAAAPASGGFMKWLKGLFGVQPAAAPAPAPAAQEAAARPARE
RGERGEKAERGERGGDRNRNRRGGAAQQAGGRDQAAAGGGRGQAQRAEREGKETREPREG
REARGGRDNREGREAREARETREPREPREQREPREPREPREQREPRERAETADASEAPRG
ERRERGERRKPAQHVATLETVNRGESALAEAAEKPAYAPGAEAGVDADSNARDGEERRRR
RRGRRGGRREREDEGAAHAAEGGEGVTVEAFEHAEQAQQGVAPAAGHEPQHVAQAGAGAA
AVAAAAIAADSAAHVESGAKVEPQPAAGAPVADTQRAEAAPARLVEAPAQAASTAQAEVE
QAAPATAAHVQPAAADVAHEPPAPAATAPAEAAPAEAPAAEASEVAAPAVAPAVVAEPAP
VAETQQPAAVAAAAPLAAPVAHEPAPVAETHVPAAARAEAATPASVSTAGASLDTVLEAA
GLVWVNTDTDKLRAAQAAAAQIVPPARVPRERKPLPPVDAAPMQQVETTHR
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgaaacgcatgctgttcaatgcgacgcagcaggaagaactgcgcgtcgccatcgtcgat
gggcagaagctcatcgacatcgacatcgaaaccgccggccgcgaacaacgcaaaggcaac
atctacaagggcgtcgtcacccgcatcgaaccgtcgctcgaagcctgcttcgtcaactac
ggcgaagaccgccacggcttcctgccgttcaaggaagtcgcccgccagtacttcaaggaa
ggcgtcgacatgcgctccgcgcgcatccaggacgcgttgcgcgaaggccaggagctgatc
gtccaggtcgagaaggaggagcgcggcaacaagggcgcggcgctcaccaccttcatctcg
ctcgccggccgctatctcgtgctgatgccgaacaacccgcgcggcggcggcgtgtcgcgc
cgcatcgagggcgacgagcgccaggaactgcgcgagacgatggcgcaactgcagatcccc
gacggcatgagcatgatcgcccgcacggcgggcatcggccgcagcgccgaggaactgcag
tgggacctgaactacctgctgcagctctggcgcgcgatcgaggcggcgtcgcaaagcggc
catcccggccagccgatgctgatctacctcgaatcgagcctcgtgatccgcgcgatccgg
gactatttccagcccgacatcggcgaaatcctgatcgacacgaccgagatctacgatcag
gcccgcgcgttcatggacatcgtgatgcccgacaacgtcggcaaggtgaagcgctatcac
gacgacgtccccctcttctcgcgcttccagatcgagcaccagatcgaaaccgcgtactcg
cgcacggtgccgctgccgtcgggcggcgcgatcgtgatcgaccacaccgaggcgctcgtc
gcgatcgacgtgaactcggcgcgcgcgaccaagggcgcggacatcgaggagacggcgacc
cgcacgaacctcgaggcggccgatgaagtggcgcgccagctgcgtctgcgcgacctcggc
ggcctgatcgtgatcgacttcatcgacatggagtcggccaagagccagcgcgaagtcgag
cagcgcctgaaggacgcgctcaagcacgaccgcgcgcgcgtgcagatgggcaagatctcg
cgcttcggcctgatggagctgtcgcgccagcgcctgcgcccggccctgtccgaaggcagc
cacgtcacctgcccgcgctgcaacggcacgggccacatccgcgacaccgaatcgtccgcg
ctgcaagtgctgcggatcattcaggaagaagcgatgaaggagaacaccgcggcgatccac
tgccaggtgcccgtcgaggtgacggccttcctgctcaacgaaaagcgccaggaaatcaac
aagatcgagtcgcgcttcaaggtcggcgtcgtgctgatcccgaacaagcacctcgatacg
ccgcactacaagctcgagcgcctgcgtcacgacgatgcgcgcctcgacgatccgcgcgca
tcgtggaagatggccgaggaagccgcccgcgagctcgaggcggaaaccggctacagcaag
cgcgccgaggaaacgaagccgcgccaggaagcggccgtcaagggcatcacgcccgagcgt
ccggcgccgagccccgcgccgcagcgccagagcgcgccggaagcggctgcgcccgtggcc
gccgcgcccgcgagcggcggtttcatgaagtggctgaagggcctgttcggcgtgcagccc
gccgcggcgcccgcaccggcgcccgccgcgcaggaagcggccgcgcgtccggcgcgcgag
cgtggcgaacgcggcgagaaggccgagcgcggcgaacgcggcggcgatcgcaaccgcaac
cgtcgcggcggcgccgcgcagcaagccggcggacgcgatcaggcagcggcaggcggcggc
cgcggtcaggcgcagcgcgccgagcgcgaaggcaaggaaacccgcgagccccgcgaaggc
cgcgaagcacgcggcggccgggacaaccgggaaggccgcgaagcacgcgaagcacgcgaa
acccgcgaaccgcgcgaaccgcgcgaacaacgcgagccgcgcgaaccccgtgagccgcgc
gaacagcgcgaaccccgcgaacgcgccgaaacggccgacgcctcggaagcgccgcgcggc
gagcgccgtgagcgcggtgagcgtcgcaagccggcccagcacgtcgcgacgctcgaaacc
gtgaaccgcggcgaaagcgcactcgcggaagccgctgaaaagccggcgtacgcgcctggc
gcggaagccggcgtcgacgcggattcgaacgcgcgtgacggcgaggaacgccgccgccgc
cgccgcggtcgccgtggcggccgccgcgagcgcgaggacgaaggcgcagcgcacgctgcg
gaaggcggcgaaggcgtgacggtcgaagcgttcgagcatgccgagcaagcgcagcaaggc
gtcgcgcctgccgccggccacgagccgcagcatgtcgcgcaagcgggcgcgggtgcggcg
gcagtcgcggctgcggccatcgccgctgattctgccgcgcatgtcgagagcggcgcgaag
gtcgagccgcaaccggcagccggggcgcccgtcgccgacacgcagcgtgccgaggcggcg
cctgcgcgactggtcgaagcgccggcgcaagccgcttcgacggctcaagccgaagtcgag
caagccgctccggcaaccgcggcgcacgtacagccggctgcggccgatgtcgcgcacgag
ccccccgctccggccgcaaccgcccccgccgaagccgccccggccgaagcgcctgccgcg
gaagcgtccgaagtcgccgcacccgcggtcgctccggccgtggtcgcggagcctgcgccg
gtcgccgaaacgcagcagcccgctgctgtcgcggcggccgcaccgctcgcagcgcctgtc
gcgcacgagccggctcccgtcgccgagacgcacgtcccggcggccgctcgagccgaggcg
gccactccggcctccgtctcgaccgcgggcgcgagcctcgacacggtgctcgaagccgcc
ggtctcgtgtgggtcaacaccgacacggacaagctgcgcgccgcgcaggccgccgccgcg
caaatcgtgccgcccgcgcgcgtgccgcgcgaacgcaagccgttgccgcccgtcgacgcg
gcgccgatgcagcaggtcgagacgacgcaccgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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