KEGG   Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_16720
Entry
F543_16720        CDS       T03018                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
btrh  Bibersteinia trehalosi USDA-ARS-USMARC-189
Pathway
btrh03420  Nucleotide excision repair
btrh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:btrh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    F543_16720
   03430 Mismatch repair
    F543_16720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:btrh03400]
    F543_16720
Enzymes [BR:btrh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F543_16720
DNA repair and recombination proteins [BR:btrh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F543_16720
   MMR (mismatch excision repair)
    Other MMR factors
     F543_16720
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 PhoH SpoIIAA-like
Other DBs
NCBI-ProteinID: AHG84534
Position
1712763..1715027
AA seq 754 aa
MQKIFQNRPLVSYNAATYWIKSHKEATVDFSLLLDGLNDKQREAVAAPLGNYLVLAGAGS
GKTRVLTHRIAWLIGVENVPESNILAVTFTNKAAAEMRQRIESTLMQAGNHRLFGMWVGT
FHSIANRLLRSHYLDADLPQDFQIMDTEDQLRLLKRLMKLHNIDEKHFPPKQVAWFINAQ
KDKGLRAKDIVLEQGDHNGRELVKLYQIYQDACDRAGLLDFAELLIRAYELFKNKPPILQ
RYQQRFQQILIDEFQDTNNIQYDLIRLLAGNSSHVMIVGDDDQSIYGWRGAQVENIQRFL
NDYQNAQTIRLEQNYRSTGHILNSANALIANNDNRLGKNLWTDSGDGDPVDIYCAFNELD
EARFVASQIKQWKEDHGDLNECAVLYRSNSQSRVIEEALIQANIPYRIYGGMRFFERQEI
KDALAYLRLIANRQDDAAFERVVNTPPRSIGDRTLDVLRQLTRSRQITLWQAIQVAVKEE
MLSGRATNALLRFVDLINALDNETEQMPLFEQTDFVIKNSGLYEMYKQEKGEKGEVRIEN
LEELVSATRDFIKPDEADEMSDLSAFLTHASLEAGETQASPHQEYVELMTLHSAKGLEFP
RVFIVGVEEGLFPSGMSFDEGRLQEERRLAYVGITRAKKKLTISYAELRRLYGKEERHLP
SRFIAELPEEHIREVRLRGNINRPAAFVNAKAKSTACIDNTNEWKMGQKVFHEKFGQGTV
INVEGSGEQTRLQIAFVANGIKWLIAKMAKLERN
NT seq 2265 nt   +upstreamnt  +downstreamnt
ttgcaaaaaattttccaaaatagaccgcttgtcagctataatgcagcaacttactggata
aaatcacataaagaggcaactgtggatttctctctattacttgatggcttaaacgataaa
cagcgcgaagccgtagctgctccgctcggtaattatttggtactggctggggcgggtagc
ggcaaaacccgcgtacttactcatcgtattgcgtggcttatcggggtggagaatgtgcct
gaaagcaatatccttgccgtcacctttactaacaaagccgcagcagaaatgcgtcagcgt
attgaaagtacccttatgcaagcaggtaatcatcgcctatttggcatgtgggtaggcact
ttccatagtattgccaatcgcttattacgttctcactatctagatgccgatctgccacaa
gatttccaaattatggatacggaagatcagcttcgtttgctcaaacgcttgatgaaactg
cataacattgatgaaaaacattttccacctaaacaggtggcgtggtttattaatgcccaa
aaagataaaggtctgcgagcaaaagatattgtgctagaacagggcgaccataatgggcga
gaattggtgaaactgtatcaaatttatcaagatgcctgcgaccgtgctggcttgcttgat
tttgccgagttattaattcgagcctatgagctattcaaaaataaaccaccgattttgcaa
cgttatcaacaacgctttcagcaaattttgatcgatgaattccaagatactaacaacatt
caatacgatttaatccgattactggcaggaaatagtagtcatgtgatgatcgtgggcgat
gatgatcaatctatctacggctggcgaggggcacaagtggaaaatatccaacgctttttg
aatgattatcaaaatgcccaaactatccgccttgagcaaaactatcgttctacagggcat
attcttaattcggcaaatgctctcattgccaacaacgataaccgtttaggtaaaaatctt
tggacagatagtggcgatggcgaccccgtggatatttattgtgcatttaatgaattagat
gaagctcgttttgttgcctcacaaattaaacagtggaaagaagaccatggtgatttaaac
gaatgtgccgtgctgtatcggagtaatagccaatctcgtgtgattgaagaagcgcttatt
caagccaacattccttaccgtatttatggcggtatgcgattctttgaacgccaagaaatt
aaagatgcccttgcctatttacgcttaattgccaatcgccaagatgatgctgcatttgag
cgtgttgtgaatacgccaccacgcagtattggagaccgtacccttgatgtgctgcgtcaa
ttaacccgtagccgtcaaattaccctttggcaagcaatccaagttgccgttaaagaagaa
atgttatcagggcgtgccaccaatgcgttgcttcgttttgtcgatttaatcaatgcgctt
gataacgaaactgagcagatgcccctattcgagcaaaccgattttgtgattaaaaattcc
ggcttgtatgagatgtataagcaggaaaaaggtgaaaaaggtgaagtacgcattgaaaac
ttagaagagttagtcagtgcaacccgtgattttatcaaacccgatgaagccgatgaaatg
agcgatcttagcgcatttttaacccatgcttcccttgaagcaggtgaaacacaggcatca
ccacatcaggaatatgtcgaattaatgacgttgcactcggcaaaaggattggaatttcct
cgtgtatttatcgtaggggtggaagaaggcttattcccaagtggaatgagttttgatgaa
ggcagattacaagaagagcgccgccttgcttatgtggggattacgcgagcgaagaaaaaa
ctcacgattagctatgccgaactgcgccgtttatacggcaaagaagagcgccatttaccc
tctcgctttattgctgaactgcctgaagaacatattcgcgaagtacggctacgtggaaat
atcaaccgccctgcggcttttgtaaatgccaaagcaaaatcaaccgcttgtattgataat
acgaatgaatggaaaatggggcaaaaagtgtttcacgaaaaatttgggcaaggtacggtt
attaatgtggaaggcagcggcgaacaaacccgcttacaaattgcctttgtcgccaatggc
atcaaatggctaattgcgaaaatggcaaaattggaaagaaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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