KEGG   Bordetella trematum: SAMEA390648700862
Entry
SAMEA390648700862 CDS       T04322                                 
Symbol
kdsD
Name
(GenBank) arabinose 5-phosphate isomerase
  KO
K06041  arabinose-5-phosphate isomerase [EC:5.3.1.13]
Organism
btrm  Bordetella trematum
Pathway
btrm00540  Lipopolysaccharide biosynthesis
btrm01100  Metabolic pathways
btrm01250  Biosynthesis of nucleotide sugars
Module
btrm_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:btrm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    SAMEA390648700862 (kdsD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:btrm01005]
    SAMEA390648700862 (kdsD)
Enzymes [BR:btrm01000]
 5. Isomerases
  5.3  Intramolecular oxidoreductases
   5.3.1  Interconverting aldoses and ketoses, and related compounds
    5.3.1.13  arabinose-5-phosphate isomerase
     SAMEA390648700862 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:btrm01005]
 Lipid A
  SAMEA390648700862 (kdsD)
SSDB
Motif
Pfam: SIS CBS SIS_2 Regnase_1_C
Other DBs
NCBI-ProteinID: SAI67716
UniProt: A0A157M6F4
Position
1:922511..923497
AA seq 328 aa
MSEHVPSSADALTSARNTLQTEAQAILDLRERLDTSFFHAVAMLLACKGRVVVSGLGKTG
HIARKIAATLASTGTPAFFMHAAEAAHGDLGMLTADDVLVALSHSGSSSELLTILPLARR
LGAGVIAITGNPDSELAQQADIHLDASVEHEACPLNLAPTASTTTALALGDALAVACLEA
RGFGPADFARSHPGGALGRRLLTHVRDVMRHGSALPTVASTDPLFRALEEMSAKGMGMTV
VVDDHFRPVGIFTDGDLRRLIERQGDVRGLMVAEGMTRNPRNIDPNALAAEAAGIMDTHR
LNQMLVVDDDGVLIGALHMHDLMAAKVV
NT seq 987 nt   +upstreamnt  +downstreamnt
atgagcgaacatgtcccttcttccgccgatgcgctgacatccgcgcgcaacacccttcag
accgaggcgcaggccatcctggacctgcgcgagcgcctggacaccagtttcttccacgcc
gtggccatgctgctggcctgcaaggggcgggtcgtggtcagcgggctgggcaagacggga
cacatcgcacgcaagatcgccgccaccctggcctcgaccggcacgcccgctttcttcatg
catgcggccgaagccgcccatggcgatcttggcatgctgaccgccgacgatgtgctggtg
gcgctgtcgcactccggcagcagcagcgagttgctgaccattctgccgctggcccgccgc
ctgggcgcgggcgtgatcgcgattacgggcaaccccgactccgagctggcgcaacaggcc
gacatccacctggacgccagcgtcgaacacgaggcctgccccctcaacctggccccgacc
gccagcaccaccacggcactggcgctgggcgatgccctggcggtcgcctgtctggaggcg
cgcggtttcggcccggccgacttcgcccgctcgcatccgggcggcgccctgggccgccgc
ctgctgacccatgtgcgcgacgtcatgcgccacggatcggcgctgcccacggtggccagc
accgatccgctgttccgcgccctggaggaaatgtcggccaagggcatgggcatgacggtc
gtggtcgatgatcacttccgcccggtgggcatcttcaccgacggcgacctgcgtcgcctg
atcgagcgccagggcgacgtacgcggcctgatggtggccgaaggcatgacgcgcaatcca
cgcaacatcgatcccaatgcgctggccgccgaggcagccggcatcatggacacacaccgc
ctgaaccagatgctggtcgtcgacgacgacggcgtgctgatcggcgccctccacatgcat
gacttgatggcagccaaagtagtatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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