KEGG   Bordetella trematum: SAMEA390648702512
Entry
SAMEA390648702512 CDS       T04322                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
btrm  Bordetella trematum
Pathway
btrm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:btrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SAMEA390648702512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:btrm03400]
    SAMEA390648702512
Enzymes [BR:btrm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     SAMEA390648702512
DNA repair and recombination proteins [BR:btrm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SAMEA390648702512
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: SAI70837
UniProt: A0A157SKA2
Position
1:2643514..2644377
AA seq 287 aa
MMPAPRPNPLQRLWLREIGIEKTWQRAESVAPAAPASRVSQPEAAPAAARADLPVAHRLP
PETVAPAAAVAAPAAPERQASAPDAPPAVTPSAATEVARRVAHADLAQLREQVLACTACG
LCQGRKHAVFGDGAQTARWMVVGEAPGQEEDRSGLPFVGRSGRLLDAMLAAVGMSRERDV
FIANVIKCRPPGNRNPKPEEIAACGPYLMRQITLLRPERILVLGRFAAQTLLGVDASIAN
LRGRLHQLKADDGREIPVVVSYHPAYLLRSPGEKARAWQDLRLAAKG
NT seq 864 nt   +upstreamnt  +downstreamnt
atgatgcccgcgccacgtccgaatcccctgcagcgcctgtggctgcgcgagatcggcatc
gagaaaacctggcagcgcgcggaatccgtggcgcctgcggcgccagcctcccgggtcagc
cagcccgaggcggctcccgcagcggctcgcgccgacctgcccgtagcgcatcgcttgccg
ccggaaacggtggcgccggccgcggctgtcgcggcccctgccgcgcccgagcgccaggcg
tccgctccggatgcgccgccggccgtcacgcccagcgcggccaccgaagtggcgcggcgg
gtggcccatgccgacctggcccagttgcgcgagcaggtgctcgcatgcacggcctgcggg
ttgtgccagggacgcaagcatgccgtcttcggtgacggggcgcagactgcgcgctggatg
gtggtgggcgaggcgcctggccaggaagaggatcgcagcgggctgcccttcgtcggccgc
tcgggccgactgctggacgccatgctggcggcggtggggatgagccgcgagcgcgatgtc
ttcatcgccaatgtgatcaagtgccgtccgccgggcaatcgcaaccccaagcccgaggaa
atcgcggcttgcggaccatatctgatgcgccagatcaccctgctgcgtccggagcggatt
ctggtgctggggcgttttgcagcccagacattgctgggcgtggatgccagcattgccaat
ctgcgtggccgcctgcatcagctcaaggcggacgatgggcgcgagatcccggtggtggtg
agctatcacccggcctatctgctgcgcagcccgggcgaaaaggcgcgtgcctggcaggat
ctgcgcctggctgcaaagggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system