KEGG   Bacillus tropicus: FJR70_17100
Entry
FJR70_17100       CDS       T06661                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
btro  Bacillus tropicus
Brite
KEGG Orthology (KO) [BR:btro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btro03021]
    FJR70_17100
Transcription machinery [BR:btro03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FJR70_17100
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF GerE HTH_23 HTH_24 Xre-like-HTH DUF134
Other DBs
NCBI-ProteinID: QDF24661
Position
complement(3221638..3222183)
AA seq 181 aa
MAQIGIEEELMLAYQSGDKQAGEKLYVLIKPALYTFLYRFNRDEQLSIDLVQDTFLTLER
KKHMYEPEKGKIKTYLFQIGYRLMINKLNRRKKWRTLLPFLVPIPEKEFSHEDRLTVREA
ILKVPEEQRAVLILSYYHDMQQKEIAEVLDIPVGTVKSRLHNGIKKLKQLLEVDEIERKS
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atggcgcagattgggattgaggaggaacttatgcttgcgtatcaaagtggagataagcag
gctggggaaaaactatacgttttaatcaaaccagcgctatacacatttttatatcgattt
aaccgagatgaacaattgagtatcgaccttgtccaagatacgtttttgacgctagagcgt
aagaaacatatgtatgaacctgaaaagggaaaaataaaaacgtatttatttcaaattggt
tatcgtcttatgattaataaattaaataggagaaaaaagtggcgtacgcttttgccattt
ttagtgccgattccggaaaaagaattttctcacgaagatcggctcacagtaagagaagca
attttgaaagttccagaagagcaaagagcagtcctaatcctttcttattatcatgacatg
cagcaaaaagaaattgcagaggtattagatattccagttggaacggtgaagtcgagactt
cataacgggataaagaaattgaaacaattgctggaggtggacgaaattgagcgaaaatcc
ctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (14)   

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