KEGG   Kyrpidia tusciae: Btus_0146
Entry
Btus_0146         CDS       T01220                                 
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bts  Kyrpidia tusciae
Pathway
bts03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bts00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Btus_0146
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bts03021]
    Btus_0146
   03400 DNA repair and recombination proteins [BR:bts03400]
    Btus_0146
Enzymes [BR:bts01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Btus_0146
Transcription machinery [BR:bts03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Btus_0146
DNA repair and recombination proteins [BR:bts03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Btus_0146
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C
Other DBs
NCBI-ProteinID: ADG04924
UniProt: D5WRR3
Position
144611..148261
AA seq 1216 aa
MLDVNNFEFMKIGLASPEKIRSWSHGEVKKPETINYRTLKPEKEGLFCEKIFGPTRDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGDTPLEKKQLLSEKEYRSYREKYGYAFEAGMGAEAIKKLLQ
EIDLDKEAEQLKEELRTAQGQRRNRAIKRLEVVEAFRQSGNRPEWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKE
MALELFKPFVMKELVSQGLAHNIKSAKRKVERVSPEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAHNIL
NPKDGKPVVTPTQDMVLGSYYLTIEKEGGKGEGRIFADPNEAIAAYERGIVGLHSRIALP
AASLNKTSLTAAQQRALLITTVGKLIFNEIFPADFPYINTGSMENLLKGTPDRYFIFEKG
ADVSARIRDLNVADSQAVVKGYLGSIIADCFRRYGTTETAVILDRIKKLGFHYSTKAGIT
ISVADITVPEEKEEILAEAEKNVQVVQNQYRRGLITEDERYGRVISIWGKAKDDLTDVLM
RSLDHFNPIYMMANSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYF
ISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGFEVDEIRDGREVIE
DLFDRINGRVAFQNVHHPETGEVIVHRNELIDEDKARAIVEAGIRKVVIRTVLTCRTKHG
VCVRCYGRNLATGKMVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQ
ELFEARNPRGQAVITEIDGTVADIRDGKDKREIEIAGEKETKVYAVPYGSRIRVIVGQMV
EAGDELIEGSVDPKDMLRVKGLKGVQNYLLREVQRVYRLQGVDINDKHVEVMIRQMLRKV
RIVDSGDTDLLPGTYVDLRDYEEANRQAFASGLEPAIARPALLGITKASLETDSFLSAAS
FQETTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMARYRGLTLEEEALPEPAVEDE
ENPGWEEDVEAETVTE
NT seq 3651 nt   +upstreamnt  +downstreamnt
ttgttggacgtcaacaacttcgagttcatgaagatcggcctggcatcgccggaaaagatt
cgctcgtggtcgcacggtgaagtcaaaaaacccgagacgatcaattaccgcacgttgaaa
ccggaaaaagagggtctcttttgcgagaaaattttcggccccacccgggattgggagtgc
cactgtggcaaatacaaacgggttcgatacaaaggggtggtctgcgaccgctgcggtgtg
gaagtcacccgggcgaaagtccggcgggagcggatgggacatatcgaactggcggcgccg
gtctcgcatatttggtattttaaagggatccccagccgcatgggcttggtattggatatg
tcccccagggccttggaggaggtgatttattttgcctcctatgtcgtgaccgatcccgga
gacacgcctcttgagaaaaaacaacttctttcggaaaaggagtaccgcagctatcgggag
aaatacgggtatgcctttgaggcggggatgggcgcagaagcgatcaaaaagcttctccaa
gagatcgatttggacaaagaagcggagcagctcaaagaagagcttcgcaccgcccaaggc
cagcgccgaaaccgggccatcaagcgcctggaggtggtggaggccttccgccagtccggc
aatcgcccggagtggatgatcctcgacgtattgccggtcattccgccggaattgcgccca
atggtacaactggacgggggaagatttgcaacgtctgatttgaacgatctgtaccggcgg
gtgatcaaccggaacaaccggctcaagcggctcctggacctgggtgctccagacattatc
gttcaaaacgaaaaacggatgcttcaggaagcggtggacgccctcatcgacaatgggcgc
cggggtcggccggtgaccgggccggggaatcgaccgctgaaatccctctcccatatgctg
aaagggaagcaggggcggttccggcagaatctcctcggcaagcgcgtcgattattccggg
cgctcggtgatcgtggtgggcccagagttgaagatgtaccaatgcggtctgcccaaggag
atggccctggagctgttcaaaccttttgtgatgaaagaactggtgagtcaggggctggcc
cacaatatcaagagtgcgaaacggaaagtggagcgcgtctctcccgaggtgtgggatgtg
ctggaggacgttatccgggagcatcccgtcctgttgaaccgcgcgcccaccttgcatcgc
ctgggcattcaagcctttgaacccgtattggtggaggggcgggccatcaagctccacccg
ctggtgtgcaccgcgtacaacgccgactttgacggggaccaaatggccgtccacgtgccg
ctttcggcggaagcccaagccgaggcgagaattttgatgttggcggcccacaacatttta
aacccgaaagacgggaagccagtggtcacgccaacccaggatatggttctgggaagttat
tacctgaccattgaaaaggagggcgggaaaggcgaagggcggattttcgccgatcccaat
gaggcgatcgccgcctatgagcgggggatcgttggattgcacagccgcattgccctgccg
gccgcttctctcaacaagacgtcattgaccgcggctcaacagcgcgctctcttgattacg
acggtggggaagctgatctttaatgagattttcccggcggactttccgtacatcaatacc
gggagtatggaaaatctgctcaaggggactccagatcgctactttattttcgaaaaaggc
gcggatgtgtcggcccgaattcgcgacttgaatgtggccgattcccaagcagttgtaaag
ggctatctcggttcgatcatcgccgattgtttccggagatacgggaccacggagaccgcc
gtgatcttggaccgcatcaagaaactcggatttcactattccaccaaggcgggtattacc
atctccgtggcggacatcaccgttcccgaggagaaggaagagattctcgccgaggctgaa
aagaacgtgcaggtggtgcagaatcagtaccgccggggcctgatcaccgaggatgaacgg
tacggacgggtgatctccatctgggggaaggccaaagacgatctgaccgacgtcctgatg
cgctctttggatcactttaacccgatctatatgatggccaactccggtgcacggggtaac
gtgtcccagattacgcaattggccgggatgcgcgggctgatggccaatccctcgggcagg
atcatcgagctgccgattaaatcgaacttccgggaaggtctaacggtgttggagtatttt
atttctactcacggagctcggaaaggtctcgcggacacagccctgcggacggcagactcg
gggtatttgacccggcgcctggtggacgtcgcccaagatgtcatcgttcgagaggaagac
tgcggcaccgacaaggggtttgaagtggatgagattcgggatggtcgggaagtcatcgaa
gacctgttcgatcggatcaatgggcgagtggcgtttcagaatgtccatcatcctgagacc
ggcgaggtcatcgtccatcgcaacgagctgatcgatgaagacaaagcgcgggccattgtt
gaagcgggcatccggaaggtcgtcattcggacggtcctgacctgccgcacgaaacatggg
gtgtgtgtgcggtgttacggccggaatctcgccacgggcaagatggtggagatcggcgag
gcggtgggaatcatcgcggcccagtccatcggggagccgggcacccagttgacgatgcgg
acgttccacaccggcggcgtggccggggacgatatcactcaggggttgcctcgcgtccag
gagctttttgaagcgaggaatccccggggccaggcggtgatcaccgagattgatgggacc
gtggccgacatccgggacggcaaagataaacgggagatcgagatcgcgggcgaaaaggaa
acgaaggtgtacgcggtcccctatggttcccggatccgggtgatcgtgggtcaaatggtg
gaggccggggacgagttgatcgaagggtctgtcgatcccaaggatatgctccgggtcaaa
ggactgaagggggtccagaattaccttctccgggaagtccagcgcgtctaccggcttcag
ggggtagacatcaatgacaagcatgtcgaggttatgattcgccagatgttgcgcaaggtt
cgaatcgtggatagcggggataccgatctgcttccggggacttacgtggatctccgggat
tacgaggaagcgaaccgccaggcctttgccagcggcctcgaaccggcaattgctcgcccg
gctctcctcgggatcaccaaggcttctctggagaccgattcgttcttgtcggcggcgtca
ttccaagagacgacccgggtcctcaccgatgcggcgatcaaaggaaaggtcgaccggctg
cttgggttgaaggaaaatgtgatcatcgggaagttggtcccggcggggacgggaatggcg
cgctaccggggcttgacattggaggaggaggcactgccggagccggcggtggaagatgaa
gaaaaccccggctgggaagaggacgtcgaggcggaaaccgtcacggaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (46)   

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