KEGG   Bacillus thuringiensis HD1011: BF38_4987
Entry
BF38_4987         CDS       T03675                                 
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
btw  Bacillus thuringiensis HD1011
Pathway
btw03030  DNA replication
btw03430  Mismatch repair
btw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:btw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BF38_4987 (polC)
   03430 Mismatch repair
    BF38_4987 (polC)
   03440 Homologous recombination
    BF38_4987 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:btw03032]
    BF38_4987 (polC)
   03400 DNA repair and recombination proteins [BR:btw03400]
    BF38_4987 (polC)
Enzymes [BR:btw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BF38_4987 (polC)
DNA replication proteins [BR:btw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BF38_4987 (polC)
DNA repair and recombination proteins [BR:btw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BF38_4987 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon HHH_3 RNase_H_2 DUF1409 DEDDh_C
Other DBs
NCBI-ProteinID: AJG77617
Position
complement(4844375..4848676)
AA seq 1433 aa
MSLTNEQKERFQILLQQLQIPDDLINQYLQGGGIERLVIDKANKSWHFNLQVPRILPTEL
YELLETKLKQSFSHIARTTFALETENKQFTEEEVRAYWPLCTERITFSPMFAYLKKQLPQ
VNGVKLLINVNNELESTALKKNVAKPVGDQYEAFGFPRFQLDTHIQQNTEEMQKFREQTQ
QEDRERVIQAMEEMAKKQAEESSVVHEGPITLGYLIKPDEEITPMREIQDEERRKTVQGY
VFHVETKELRSGRTLLTLKITDYTDSIMIKMFSRDKEDIPMLQSLKKGMWVKARGSVQND
TFVRDLVMIANDINEITGPSRKDKAPEGEKRVELHLHTPMSQMDAVTPVSKLVAQAGKWG
HEAIAVTDHAVAQSFPEAYSAGKKAGVKVIYGVEANLVNDGVPIAYNEEHRLLADETYVV
FDVETTGLSAVYDTVIELAAVKVKGGEIIDRFESFANPHQPLSATIIELTGITDDMLTDA
PEVDEVFKKFEEWMGDHTLVAHNASFDMGFINVGFKKAGLEKTKNPVIDTLELARFLFPE
MKNHRLNTLCKKMDIELTQHHRAIYDTEATGYLLVKMLKDVIEKGFEYHDQLNDSMGQGD
AYKRGRPSHMTLLATSDVGLKNLYKLVSYSHLNYFYRVPRVPRSLLKKYREGILVGTACD
KGEVFEAMMQKAPEEVEEIAQFYDYIEVMPPEVLRHLVERELVRDEGQLKTIISNLVKLG
GTLDKPVVATGNVHYLDPEDAMYRKILVSSQGGANPLNRHSLPPVHFRTTDEMLECFSFL
GEDVAKEIVVTNTQKIASLIGDVHPVKDDLYTPKIEGADDETRDMSYKMARSIYGEELPE
IVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMMEITEVN
PLPPHYVCPKCKQSEFFNDGSVGSGFDLPDKECPTCNIPYVKDGHDIPFETFLGFKGDKV
PDIDLNFSGEYQPRAHNYTKVLFGEDYVYRAGTIGTVAEKTAYGYVKGYANDHNLTIRNA
EIDRLVAGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQYPADSIGAEWRTTHFDFHSIH
DNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGPESLGVTEEQINCKTG
TLGIPEFGTKFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNANELIYNGTCTLSEVIG
CRDDIMVYLIYQGLDPSLAFKIMESVRKGKGVPEEWEEDMKSNNVPGWYIDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHFALLFYAAYFTVRADDFDVEAMAKGSASIRARIDEIAQK
GLDAAPKEKSLLTVLEMTLEMCERGYSFQKVDLYRSHATDFIIDGDSLIPPFNAVPGLGT
NAALSIVEARKNGEFLSKEDLQQRSKVSKTIIEYLDSQGCLGDLPDQNQLSLF
NT seq 4302 nt   +upstreamnt  +downstreamnt
atgtctttaacaaatgaacaaaaagagcgatttcaaattttgctccagcagttgcaaata
ccagacgaccttataaatcaatatttacaaggcggtggtattgaaagactcgttatcgat
aaagcgaataaaagttggcattttaatttacaagtgccacgtattttgcctacagaatta
tatgaattgctagaaacaaagcttaagcaatcattttctcatattgcaagaacaacattt
gcattagaaacagagaataaacaatttactgaagaagaagtgagggcgtattggccactt
tgtacggaacgaattacattttcacctatgtttgcttatttaaagaagcagcttccgcag
gtgaatggagtgaagttacttataaatgtgaataatgagctggaatctactgctttaaag
aaaaacgttgcaaaaccagtaggggatcaatacgaggctttcggattcccgcgttttcag
ttagacacacatatacagcaaaatacagaagaaatgcaaaagtttcgtgagcaaacgcaa
caagaagaccgtgagcgtgttatacaagctatggaagaaatggcaaagaagcaagctgaa
gaaagcagcgttgtgcatgaaggaccgattacacttgggtatcttattaagccggatgaa
gagattacaccgatgcgagaaattcaagatgaagaaagaagaaaaacagttcaaggatat
gtcttccatgtggaaacaaaagaacttcgtagtggacgtacgttattaactttaaaaata
acggattatacagattctattatgatcaaaatgttctcacgtgataaagaagatattcca
atgctacaatccttaaaaaaaggaatgtgggtgaaggctcgtggttctgtccaaaatgat
acatttgttcgagatttagtaatgattgcaaatgatattaatgaaataacaggaccgtct
cgtaaagataaagcaccagaaggtgaaaaaagagtagagcttcatcttcatactccaatg
agtcaaatggatgctgttactccagtttctaagcttgttgctcaagctggtaaatgggga
catgaggctattgcggttacagaccatgctgtggctcagtcgttcccggaagcatattct
gcggggaaaaaggctggagttaaagttatatatggtgtggaagcaaacttagtgaatgac
ggagtaccaattgcttataatgaagaacatcgtttactggctgatgaaacatatgttgtt
ttcgacgttgagacgacaggtttatcagctgtgtatgatacagttattgagttagctgct
gtaaaagtaaaaggtggcgaaattattgaccgctttgaatcttttgcaaatccacatcaa
ccattatcggcaacaatcattgagttaacaggtattacagatgatatgttaaccgacgca
ccagaagtagatgaagtgtttaaaaagtttgaggaatggatgggtgaccatacacttgtt
gctcataacgcaagcttcgatatgggctttattaatgtaggattcaaaaaagctggttta
gaaaaaacgaaaaatccggtaatagatacgttagagcttgcaagattcttattcccagaa
atgaaaaatcatcgtttaaatacgttatgtaaaaagatggacattgaattaactcagcat
caccgtgcgatttatgatacagaagcaacgggatacttactagtgaaaatgttaaaagat
gtaattgaaaaaggttttgaatatcacgatcaattaaacgatagtatgggacaaggggat
gcatataagcgcgggcgtccaagtcatatgacattacttgctacatcggatgttggattg
aaaaatttatataaacttgtttcatattctcatctaaattacttttaccgtgtaccgcga
gtaccaagatcactattaaaaaaatatcgtgaaggtattttagtaggaacggcttgtgat
aaaggtgaagtgtttgaggcaatgatgcaaaaagctcctgaagaggtagaagaaattgcg
cagttctacgattacattgaagtaatgccaccagaagtgttacgtcatttagtagagcgt
gaacttgttcgggatgagggacaattaaaaacaattatttcaaacttagtaaaactaggt
gggacgttagataaaccagttgtcgctaccggaaacgtgcattacttagatccagaagat
gcaatgtatcgcaaaattttagttagttcgcagggcggagccaatccgttaaaccgacat
tcattaccacctgtacatttccgtacaaccgatgaaatgttagagtgtttctcattctta
ggtgaagatgtagcgaaagaaattgtcgtaacgaatacacaaaagattgcatcattaatt
ggcgatgttcatccagtaaaagatgatctatacacaccgaaaattgaaggtgcagatgat
gaaacgcgtgatatgagttataaaatggcgcgtagcatttatggtgaagagttacctgaa
attgtagaagcgcgtttagaaaaagaattaaaaagtatcatcgggcatggattcgccgta
atttatttaatttcacataagcttgtgaaaaaatcgttagtagacggatatctagtaggt
tcgcgtggatcggtaggttcatcattcgttgcaacgatgatggaaattacagaagtaaac
ccattaccaccacactatgtatgtccgaagtgtaagcaatcggaattctttaatgatggt
tctgtaggttctggttttgacttaccggataaagaatgtccaacttgtaatattccatat
gtaaaagatggacatgacattccgttcgaaacgttccttggatttaaaggagataaggta
cccgatatcgatttgaatttctccggggaataccaaccacgtgcccataactatacgaaa
gtactattcggtgaagattatgtatatcgtgcaggaacgattggtacagttgcggaaaaa
actgcttatggatatgtaaagggttatgcaaatgatcataacttaacgattcgaaatgca
gaaattgaccgcttagtagcaggatgtaccggtgtaaaacgtacaacaggacagcatcca
ggtggtattatcgttgtgccagattatatggacatttttgatttctcaccaatacagtat
ccagcagattcaataggtgctgagtggagaacgacacactttgacttccactctattcat
gataatttattgaagcttgatatactaggacacgatgatccgacagttattcgtatgtta
caagatttaagtggtattgatccaaaaacaattccaacggatgatccagaagtaatgaaa
attttctcagggccagaatcgttaggcgtaacggaagaacaaattaactgtaaaacaggt
acacttggtataccagagtttggtacgaaattcgtaagacagatgttagaagagacgaaa
ccgacgacattctcagagttagtccaaatttctggattatcacatggtacggacgtatgg
cttggtaatgcaaacgagttaatttataacggtacatgtacgctgagtgaagttatcggt
tgtcgtgatgacatcatggtatatttaatctatcaaggtttagacccatcattagccttc
aaaatcatggagtcagtacgtaaaggtaaaggtgtaccagaagaatgggaagaggacatg
aaaagtaataatgtaccaggttggtatattgattcatgtaagaagattaagtacatgttc
ccgaaagcccatgcggctgcttacgtacttatggccgtgcgtattgcatactttaaagtg
catttcgcgcttttattctatgcggcatactttacggttcgtgcagatgactttgacgta
gaagcgatggcaaaaggttcagcatctatacgtgcaagaattgatgaaattgcgcaaaaa
ggtttagatgcagcaccgaaagagaagagtttattgacggtactagaaatgacacttgaa
atgtgtgagcgtggatactcattccaaaaggtggatttatatcgctcacatgcaacagac
tttattattgatggagactcattaatccctccatttaatgcggtgcctggtcttggtaca
aacgcagctttaagtattgtggaagcacgtaaaaatggagaattcttatcaaaagaagac
ttgcagcagcgtagtaaggtttcgaaaacaattattgagtatttagatagtcaaggttgt
ttaggtgatttgccggatcaaaaccagttatcgctgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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