KEGG   Bacillus thuringiensis HD1011: BF38_5039
Entry
BF38_5039         CDS       T03675                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
btw  Bacillus thuringiensis HD1011
Pathway
btw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:btw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BF38_5039 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btw03021]
    BF38_5039 (rpoZ)
   03400 DNA repair and recombination proteins [BR:btw03400]
    BF38_5039 (rpoZ)
Enzymes [BR:btw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BF38_5039 (rpoZ)
Transcription machinery [BR:btw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BF38_5039 (rpoZ)
DNA repair and recombination proteins [BR:btw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BF38_5039 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AJG75487
Position
complement(4902786..4902998)
AA seq 70 aa
MLNPSIDSLLTKIDSKYTLVTVAAKRAREMQLANNCVVEKPVSHKCVGKALEEIDMEALS
YVPSEDKVTE
NT seq 213 nt   +upstreamnt  +downstreamnt
atgttaaatccatcaattgattcattattaacaaaaatcgattctaaatatacacttgta
acagtggctgcaaaacgtgcgcgcgaaatgcaacttgctaataactgtgttgtagaaaaa
ccagtttctcataaatgtgtaggtaaagcattagaagaaatcgatatggaagcgttaagc
tacgtaccaagtgaagataaagtaactgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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