KEGG T03233: BM1374166

Bartonella tribocorum BM1374166: BM1374166_01369

Entry

BM1374166_01369   CDS       T03233

Symbol

uvrA

Name

(GenBank) excinuclease ABC subunit A

K03701

excinuclease ABC subunit A

Organism

btx Bartonella tribocorum BM1374166

Pathway

btx03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:btx00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BM1374166_01369 (uvrA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:btx03400]
    BM1374166_01369 (uvrA)
DNA repair and recombination proteins [BR:btx03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BM1374166_01369 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BM1374166_01369 (uvrA)

SSDB

Motif

Pfam:

UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 AAA_25 AAA_21 DnaJ_CXXCXGXG RsgA_GTPase AAA_23 nSTAND1 nSTAND3 Pilus_CpaD BCA_ABC_TP_C

Other DBs

NCBI-ProteinID:

CDO49041

Position

1533438..1536353

AA seq 971 aa
MTHQKYISIRGAREHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEVMQKPDVDRIDGLSPAISIEQKTTSRNPRSTVGTVTEIHDYMRLLFARIGI
PHSPATGRPIESQTVSQMVDQIMSLPEGTRIFIMAPLVRGRKGEYKKELTELLKKGFQRA
KVDGKFYEIPDIPALDKKYKHDIDVVVDRIVVQKDITSRLADSIETCLQLANGLAIVEMA
DQPLAQKETAKESAHKSKNDTHKRLLFSEKFSCPVSGFSIPEIEPRLFSFNNPFGACPLC
DGLGIKKAMDPLKIVPNKNLTLKDGAIAPWAKSDSLYYSQTLEALGKAYGFKLTDQWCKL
SDEAQQAILYGTKRNEISFIYRNDSRSHKMTQPFEGIIPNMERRWKETDSAWSREEIERY
MSSSPCPACHGYRLKPEALAVKIHGMHIGQISDLSILKADDWFANIHQYLTEKQRNIAVR
ILKEIRERLAFLNHVGLEYLTLSRNSGTLSGGESQRIRLASQIGSGLTGVLYILDEPSIG
LHQRDNERLLEMLRHLRDLGNTVIVVEHDEDAILTADHVVDMGPAAGVHGGKVIAQGTPQ
EIIENQASLTGQYLSGKMAVRMPTERRKISKSKTLKVIGAKGNNLKNISANIPLGTFTCI
TGVSGGGKSTFLIETLFKAASHQIMGSHHSPARYDKIEGLEFLDKVIDINQSPIGRTPRS
NPATYTGAFTPIRDWFAELPESKARGYKAGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCKGKRYNRETLEIKFKGQSIADILDMTIEKAEEFFHAVPAIHNKMETLIKVGLG
YIKVGQQATTLSGGEAQRIKLAKELARKTTGRTLYILDEPTTGLHFHDISKLLEVLHELV
EQGNTVIVIEHNLDVIKTADWIIDLGPEGGDRGGEIVAVGRPEDIIKVPASYTGKFLKDV
LQRQSLYNSNA

NT seq 2916 nt +upstreamnt +downstreamnt
atgactcatcaaaaatatatctccattcgcggtgcacgtgaacataaccttaaaaatatt
gatctcgatcttcctcgtgataaactcattgttataacaggactttctggatcaggaaaa
tcatctttagcttttgatacaatttacgctgaaggacaacgccgctatgtcgaaagcctt
tcagcttatgcacgccaatttttggaagttatgcaaaaacctgatgtcgaccgtatcgat
ggcctttctccagccatctccattgaacaaaaaacaaccagccgcaatcctcgttcaacg
gtcggcactgtcactgaaatccacgactatatgcgtctcctttttgcacgtattggcatt
cctcattcccctgctacaggacgccccattgaaagccaaacagtaagtcaaatggtggac
caaattatgtccttaccagaaggaacccgaatttttattatggctcccttggtgcgagga
cgaaagggagaatataaaaaagaactaacagaacttttaaaaaagggatttcaacgcgct
aaagttgatggaaaattctatgaaatccccgatattccagctcttgataaaaagtataaa
catgacatcgatgtcgttgtagaccgcattgtcgtacagaaggatatcacctctcgcttg
gctgatagtatagaaacctgtttacagctagcaaatggacttgccattgttgaaatggca
gaccaacccttggcacaaaaagaaacggcaaaagaatcggctcataagtcaaaaaatgac
acacacaaacggcttcttttttcagaaaagttttcctgccctgtatcgggattctctatc
cctgaaattgaaccacgtcttttttcgttcaataatccttttggagcctgtcctctttgc
gatggactaggaatcaaaaaggcaatggacccactgaaaattgtgcccaataaaaatctt
accttaaaagacggagccattgcaccttgggctaaatcagattcactttattatagccaa
accttagaagcattaggaaaagcttacggtttcaaacttacagaccaatggtgtaaactc
tctgatgaggcacaacaagctattctctacggtacaaaaagaaatgaaatctcctttatc
tacaggaatgattctcgttcgcataaaatgactcaaccttttgaaggaatcatccccaac
atggagaggcgctggaaagaaaccgattctgcttggtcccgtgaagaaattgagcgttat
atgtcttcttcaccttgcccagcctgtcacggttatcgtttaaaaccagaggcacttgct
gtgaaaatccacgggatgcatattgggcaaatatcagatctttctattctaaaagccgat
gattggtttgccaatatccatcaatatctcacagagaaacaacgtaatatcgcggtacgt
attttaaaagaaattcgcgaacgcttagcctttttaaatcatgtaggattggaatatctt
accttatctcgaaattcagggaccctttcagggggagaaagccaacgtattcgattagcc
tcccagattggttctggtcttacaggcgtcctttatattttagacgaaccatccatcggt
ttacatcaacgggataatgaacgtcttttggaaatgctgcgccatttgcgcgatcttggc
aataccgtcattgtcgttgaacatgatgaagatgctattctcacggcagaccatgttgtc
gatatgggccctgctgcaggcgttcatggtggtaaagtcatagcgcaaggaacaccgcaa
gaaattatagaaaatcaagcctctctcacaggacaatatctttcaggaaaaatggctgtt
agaatgccgactgagcgacgtaaaatatcaaaatcgaaaacccttaaagtcatcggtgct
aaaggtaacaaccttaaaaatatcagtgcaaatatccctcttggaaccttcacatgcata
accggtgtttctggaggaggaaaatcaacatttcttattgaaacgcttttcaaagcagca
tcacatcagatcatgggtagtcatcacagccctgctcgctatgataaaatcgaaggatta
gaatttctggataaagtcatcgatatcaaccagtctcccatcggacgcaccccacgctct
aatcccgcaacctatacaggcgcttttacaccgattcgtgactggtttgccgagcttcca
gaatcaaaagcccgtggttataaagcaggacgtttttcatttaatgttaaaggaggacgt
tgcgaagcctgtcagggtgatggagtcatcaaaattgaaatgcactttttaccagatgtc
tatgtcacttgtgatgtctgtaaaggaaaacgctacaatcgagaaacattagaaataaaa
ttcaaagggcaatctatcgccgatattttggatatgacaatcgaaaaggcagaagaattt
ttccacgctgttcccgctattcataataaaatggagaccctcattaaagtaggattgggt
tacataaaggtaggacagcaagcgaccacgctttctggtggagaagcgcaacgtataaaa
cttgcgaaagaacttgcgcgcaaaacaacgggacgtacactctatattttggatgagccg
acaacaggtttacactttcatgatatttccaagcttcttgaagtgctccatgaactggtc
gagcaaggcaacaccgtcatcgtcattgaacataaccttgacgttatcaagacagccgac
tggattattgatttaggaccagaaggtggagatcgcggtggtgaaatcgttgcagttgga
cgccctgaagacattattaaagttcccgcttcctatacgggaaaatttctaaaagatgtt
ttacagcgccaatctctctacaattcaaacgcttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (22)   

Download RDF

DBGET integrated database retrieval system